STRINGSTRING
gpr gpr spoIIP spoIIP spoVAC spoVAC spoVAD spoVAD EDS74431.1 EDS74431.1 EDS74432.1 EDS74432.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gprKEGG: bli:BL02089 5.7e-42 gpr; spore protease K06012; COG: NOG08575 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (328 aa)
spoIIPStage II sporulation protein P; COG: NOG06343 non supervised orthologous group. (245 aa)
spoVACStage V sporulation protein AC; COG: NOG09745 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.26. (147 aa)
spoVADStage V sporulation protein AD; COG: NOG06312 non supervised orthologous group. (325 aa)
EDS74431.1Putative stage V sporulation protein AE; COG: NOG13202 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99. (116 aa)
EDS74432.1Hypothetical protein; COG: NOG05963 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 7.80. (425 aa)
Your Current Organism:
Clostridium spiroforme
NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552
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