6 items (Clostridium spiroforme) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pepT	Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. (402 aa)
	rnhA	Ribonuclease HI; KEGG: cpr:CPR_1436 1.0e-35 RNAse H family protein K01163; COG: COG3341 Predicted double-stranded RNA/RNA-DNA hybrid binding protein; Psort location: Cytoplasmic, score: 8.87. (199 aa)
	EDS75546.1	Nuclease-like protein; KEGG: efa:EF0511 2.0e-23 nuc-1; thermonuclease precursor K01174; COG: COG1525 Micrococcal nuclease (thermonuclease) homologs; Psort location: Extracellular, score: 10.00. (177 aa)
	EDS75552.1	Hypothetical protein; KEGG: mxa:MXAN_0764 3.3e-18 peptidase, M24 (methionyl aminopeptidase 1) family K01423; COG: NOG08884 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (410 aa)
	EDS75553.1	Aminotransferase, class I/II; KEGG: ypn:YPN_0485 1.3e-106 aminotransferase K00812; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score: 8.87. (408 aa)
	EDS75145.1	Creatinase; KEGG: cpr:CPR_2506 5.8e-88 metallopeptidase, family M24 K01271; COG: COG0006 Xaa-Pro aminopeptidase; Psort location: Cytoplasmic, score: 8.87. (357 aa)

Your Current Organism:

Clostridium spiroforme

NCBI taxonomy Id: 428126
Other names: Clostridium spiroforme ATCC 29900, [. spiroforme DSM 1552, [Clostridium] spiroforme DSM 1552

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EDS75145.1	pepT	CLOSPI_00973	CLOSPI_00581	Creatinase; KEGG: cpr:CPR_2506 5.8e-88 metallopeptidase, family M24 K01271; COG: COG0006 Xaa-Pro aminopeptidase; Psort location: Cytoplasmic, score: 8.87.	Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.	0.591
EDS75546.1	EDS75552.1	CLOSPI_00583	CLOSPI_00589	Nuclease-like protein; KEGG: efa:EF0511 2.0e-23 nuc-1; thermonuclease precursor K01174; COG: COG1525 Micrococcal nuclease (thermonuclease) homologs; Psort location: Extracellular, score: 10.00.	Hypothetical protein; KEGG: mxa:MXAN_0764 3.3e-18 peptidase, M24 (methionyl aminopeptidase 1) family K01423; COG: NOG08884 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.	0.413
EDS75546.1	pepT	CLOSPI_00583	CLOSPI_00581	Nuclease-like protein; KEGG: efa:EF0511 2.0e-23 nuc-1; thermonuclease precursor K01174; COG: COG1525 Micrococcal nuclease (thermonuclease) homologs; Psort location: Extracellular, score: 10.00.	Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.	0.547
EDS75546.1	rnhA	CLOSPI_00583	CLOSPI_00582	Nuclease-like protein; KEGG: efa:EF0511 2.0e-23 nuc-1; thermonuclease precursor K01174; COG: COG1525 Micrococcal nuclease (thermonuclease) homologs; Psort location: Extracellular, score: 10.00.	Ribonuclease HI; KEGG: cpr:CPR_1436 1.0e-35 RNAse H family protein K01163; COG: COG3341 Predicted double-stranded RNA/RNA-DNA hybrid binding protein; Psort location: Cytoplasmic, score: 8.87.	0.773
EDS75552.1	EDS75546.1	CLOSPI_00589	CLOSPI_00583	Hypothetical protein; KEGG: mxa:MXAN_0764 3.3e-18 peptidase, M24 (methionyl aminopeptidase 1) family K01423; COG: NOG08884 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.	Nuclease-like protein; KEGG: efa:EF0511 2.0e-23 nuc-1; thermonuclease precursor K01174; COG: COG1525 Micrococcal nuclease (thermonuclease) homologs; Psort location: Extracellular, score: 10.00.	0.413
EDS75552.1	EDS75553.1	CLOSPI_00589	CLOSPI_00590	Hypothetical protein; KEGG: mxa:MXAN_0764 3.3e-18 peptidase, M24 (methionyl aminopeptidase 1) family K01423; COG: NOG08884 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.	Aminotransferase, class I/II; KEGG: ypn:YPN_0485 1.3e-106 aminotransferase K00812; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score: 8.87.	0.837
EDS75552.1	pepT	CLOSPI_00589	CLOSPI_00581	Hypothetical protein; KEGG: mxa:MXAN_0764 3.3e-18 peptidase, M24 (methionyl aminopeptidase 1) family K01423; COG: NOG08884 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.	Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.	0.640
EDS75553.1	EDS75552.1	CLOSPI_00590	CLOSPI_00589	Aminotransferase, class I/II; KEGG: ypn:YPN_0485 1.3e-106 aminotransferase K00812; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score: 8.87.	Hypothetical protein; KEGG: mxa:MXAN_0764 3.3e-18 peptidase, M24 (methionyl aminopeptidase 1) family K01423; COG: NOG08884 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.	0.837
EDS75553.1	pepT	CLOSPI_00590	CLOSPI_00581	Aminotransferase, class I/II; KEGG: ypn:YPN_0485 1.3e-106 aminotransferase K00812; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score: 8.87.	Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.	0.507
pepT	EDS75145.1	CLOSPI_00581	CLOSPI_00973	Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.	Creatinase; KEGG: cpr:CPR_2506 5.8e-88 metallopeptidase, family M24 K01271; COG: COG0006 Xaa-Pro aminopeptidase; Psort location: Cytoplasmic, score: 8.87.	0.591
pepT	EDS75546.1	CLOSPI_00581	CLOSPI_00583	Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.	Nuclease-like protein; KEGG: efa:EF0511 2.0e-23 nuc-1; thermonuclease precursor K01174; COG: COG1525 Micrococcal nuclease (thermonuclease) homologs; Psort location: Extracellular, score: 10.00.	0.547
pepT	EDS75552.1	CLOSPI_00581	CLOSPI_00589	Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.	Hypothetical protein; KEGG: mxa:MXAN_0764 3.3e-18 peptidase, M24 (methionyl aminopeptidase 1) family K01423; COG: NOG08884 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.	0.640
pepT	EDS75553.1	CLOSPI_00581	CLOSPI_00590	Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.	Aminotransferase, class I/II; KEGG: ypn:YPN_0485 1.3e-106 aminotransferase K00812; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score: 8.87.	0.507
pepT	rnhA	CLOSPI_00581	CLOSPI_00582	Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.	Ribonuclease HI; KEGG: cpr:CPR_1436 1.0e-35 RNAse H family protein K01163; COG: COG3341 Predicted double-stranded RNA/RNA-DNA hybrid binding protein; Psort location: Cytoplasmic, score: 8.87.	0.519
rnhA	EDS75546.1	CLOSPI_00582	CLOSPI_00583	Ribonuclease HI; KEGG: cpr:CPR_1436 1.0e-35 RNAse H family protein K01163; COG: COG3341 Predicted double-stranded RNA/RNA-DNA hybrid binding protein; Psort location: Cytoplasmic, score: 8.87.	Nuclease-like protein; KEGG: efa:EF0511 2.0e-23 nuc-1; thermonuclease precursor K01174; COG: COG1525 Micrococcal nuclease (thermonuclease) homologs; Psort location: Extracellular, score: 10.00.	0.773
rnhA	pepT	CLOSPI_00582	CLOSPI_00581	Ribonuclease HI; KEGG: cpr:CPR_1436 1.0e-35 RNAse H family protein K01163; COG: COG3341 Predicted double-stranded RNA/RNA-DNA hybrid binding protein; Psort location: Cytoplasmic, score: 8.87.	Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.	0.519