STRINGSTRING
lptD lptD surA surA ACS62376.1 ACS62376.1 ACS62438.1 ACS62438.1 bamB bamB bamA bamA ACS62818.1 ACS62818.1 bamD bamD ACS63013.1 ACS63013.1 ACS63737.1 ACS63737.1 lptE lptE bamE bamE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lptDOrganic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (813 aa)
surASurA domain protein; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (500 aa)
ACS62376.1PFAM: NlpBDapX family lipoprotein; KEGG: rso:RSc1146 hypothetical protein. (398 aa)
ACS62438.1PFAM: protein of unknown function UPF0005; KEGG: rso:RSc1210 hypothetical protein; Belongs to the BI1 family. (233 aa)
bamBOuter membrane assembly lipoprotein YfgL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (392 aa)
bamAOuter membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (750 aa)
ACS62818.1PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rso:RSc1715 peptidyl-prolyl cis-trans isomerase transmembrane protein. (646 aa)
bamDOuter membrane assembly lipoprotein YfiO; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (285 aa)
ACS63013.1PFAM: MLTD_N domain protein; Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; SMART: Peptidoglycan-binding LysM; KEGG: rso:RSc1516 putative membrane-bound lytic murein transglycosylase-like lipoprotein. (516 aa)
ACS63737.1Phospholipase A1; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family. (431 aa)
lptERare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family. (174 aa)
bamESmpA/OmlA domain protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (218 aa)
Your Current Organism:
Ralstonia pickettii 12D
NCBI taxonomy Id: 428406
Other names: R. pickettii 12D, Ralstonia pickettii str. 12D, Ralstonia pickettii strain 12D
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