(12 nodes) Glycerolipid metabolism network (Pedobacter steynii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOM80546.1	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (730 aa)
	AOM76342.1	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (736 aa)
	AOM76343.1	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)
	plsY	Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. (215 aa)
	AOM76644.1	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (466 aa)
	AOM76766.1	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (512 aa)
	AOM76806.1	Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
	plsX	Phosphate acyltransferase PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. (312 aa)
	AOM77655.1	Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
	AOM79427.1	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
	AOM79633.1	Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
	glpK	Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (500 aa)

Your Current Organism:

Pedobacter steynii

NCBI taxonomy Id: 430522
Other names: CIP 109507, DSM 19110, P. steynii, Pedobacter steynii Muurholm et al. 2007, WB 2.3-45

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOM76342.1	AOM76343.1	BFS30_03740	BFS30_03745	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
AOM76342.1	AOM79427.1	BFS30_03740	BFS30_21025	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AOM76342.1	AOM80546.1	BFS30_03740	BFS30_00195	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
AOM76343.1	AOM76342.1	BFS30_03745	BFS30_03740	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.976
AOM76343.1	AOM79427.1	BFS30_03745	BFS30_21025	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AOM76343.1	AOM80546.1	BFS30_03745	BFS30_00195	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.924
AOM76644.1	AOM76766.1	BFS30_05410	BFS30_06065	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	0.919
AOM76644.1	AOM79633.1	BFS30_05410	BFS30_22220	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AOM76766.1	AOM76644.1	BFS30_06065	BFS30_05410	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	0.919
AOM76766.1	AOM79633.1	BFS30_06065	BFS30_22220	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AOM76806.1	AOM77655.1	BFS30_06290	BFS30_11040	Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
AOM77655.1	AOM76806.1	BFS30_11040	BFS30_06290	Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.904
AOM77655.1	plsY	BFS30_11040	BFS30_04225	Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.	0.920
AOM79427.1	AOM76342.1	BFS30_21025	BFS30_03740	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AOM79427.1	AOM76343.1	BFS30_21025	BFS30_03745	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AOM79427.1	AOM80546.1	BFS30_21025	BFS30_00195	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
AOM79633.1	AOM76644.1	BFS30_22220	BFS30_05410	Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	0.914
AOM79633.1	AOM76766.1	BFS30_22220	BFS30_06065	Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.	0.914
AOM79633.1	glpK	BFS30_22220	BFS30_25040	Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.	0.915
AOM80546.1	AOM76342.1	BFS30_00195	BFS30_03740	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903