28 items (Trichoderma reesei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G0R7Z3_HYPJQ	Non-specific serine/threonine protein kinase. (719 aa)
	G0R8H1_HYPJQ	Small RAS-like GTPase, rho family. (269 aa)
	G0R8P2_HYPJQ	RAS-like GTPase, Rho2 subfamily. (198 aa)
	G0R9Q1_HYPJQ	GTPase-activator protein for Rho-like GTPase. (1147 aa)
	G0RAH0_HYPJQ	Predicted protein. (162 aa)
	G0RBJ9_HYPJQ	Predicted protein. (198 aa)
	G0RBK5_HYPJQ	Predicted protein. (595 aa)
	G0RC70_HYPJQ	Non-specific serine/threonine protein kinase. (821 aa)
	G0RCR4_HYPJQ	Uncharacterized protein. (2154 aa)
	gbg1	Guanine nucleotide-binding protein gamma subunit 1. (93 aa)
	G0RDN9_HYPJQ	Predicted protein. (838 aa)
	G0RE81_HYPJQ	Glycosyltransferase family 32. (333 aa)
	G0RFD6_HYPJQ	Predicted protein. (707 aa)
	G0RG10_HYPJQ	RhoGAP protein. (677 aa)
	G0RGF1_HYPJQ	Predicted protein. (746 aa)
	rac1	Ras small GTPase RAC1. (204 aa)
	G0RHR2_HYPJQ	Predicted protein. (914 aa)
	G0RIC6_HYPJQ	Predicted protein. (962 aa)
	G0RJL2_HYPJQ	Predicted protein; Belongs to the DOCK family. (2001 aa)
	G0RLR9_HYPJQ	Rho type Ras-like GTPase. (319 aa)
	G0RM95_HYPJQ	Uncharacterized protein. (1017 aa)
	stb2	Predicted protein. (837 aa)
	G0RP79_HYPJQ	Guanine-nucleotide dissociation stimulator. (982 aa)
	cdc42	Cell division control protein. (194 aa)
	rho3	Small GTPase rho3. (207 aa)
	G0RSI1_HYPJQ	Ras small GTPase, rho subfamily. (169 aa)
	G0RSK4_HYPJQ	Predicted protein. (240 aa)
	G0RWY2_HYPJQ	Predicted protein. (575 aa)

Your Current Organism:

Trichoderma reesei

NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G0R7Z3_HYPJQ	G0R8H1_HYPJQ	G0R7Z3	G0R8H1	Non-specific serine/threonine protein kinase.	Small RAS-like GTPase, rho family.	0.546
G0R7Z3_HYPJQ	G0R8P2_HYPJQ	G0R7Z3	G0R8P2	Non-specific serine/threonine protein kinase.	RAS-like GTPase, Rho2 subfamily.	0.546
G0R7Z3_HYPJQ	G0R9Q1_HYPJQ	G0R7Z3	G0R9Q1	Non-specific serine/threonine protein kinase.	GTPase-activator protein for Rho-like GTPase.	0.980
G0R7Z3_HYPJQ	G0RBK5_HYPJQ	G0R7Z3	G0RBK5	Non-specific serine/threonine protein kinase.	Predicted protein.	0.978
G0R7Z3_HYPJQ	G0RC70_HYPJQ	G0R7Z3	G0RC70	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.817
G0R7Z3_HYPJQ	G0RG10_HYPJQ	G0R7Z3	G0RG10	Non-specific serine/threonine protein kinase.	RhoGAP protein.	0.544
G0R7Z3_HYPJQ	G0RGF1_HYPJQ	G0R7Z3	G0RGF1	Non-specific serine/threonine protein kinase.	Predicted protein.	0.630
G0R7Z3_HYPJQ	G0RHR2_HYPJQ	G0R7Z3	G0RHR2	Non-specific serine/threonine protein kinase.	Predicted protein.	0.958
G0R7Z3_HYPJQ	G0RIC6_HYPJQ	G0R7Z3	G0RIC6	Non-specific serine/threonine protein kinase.	Predicted protein.	0.630
G0R7Z3_HYPJQ	G0RLR9_HYPJQ	G0R7Z3	G0RLR9	Non-specific serine/threonine protein kinase.	Rho type Ras-like GTPase.	0.546
G0R7Z3_HYPJQ	G0RP79_HYPJQ	G0R7Z3	G0RP79	Non-specific serine/threonine protein kinase.	Guanine-nucleotide dissociation stimulator.	0.559
G0R7Z3_HYPJQ	G0RSI1_HYPJQ	G0R7Z3	G0RSI1	Non-specific serine/threonine protein kinase.	Ras small GTPase, rho subfamily.	0.546
G0R7Z3_HYPJQ	G0RWY2_HYPJQ	G0R7Z3	G0RWY2	Non-specific serine/threonine protein kinase.	Predicted protein.	0.519
G0R7Z3_HYPJQ	cdc42	G0R7Z3	G0RQA2	Non-specific serine/threonine protein kinase.	Cell division control protein.	0.992
G0R7Z3_HYPJQ	gbg1	G0R7Z3	G0RCZ1	Non-specific serine/threonine protein kinase.	Guanine nucleotide-binding protein gamma subunit 1.	0.917
G0R7Z3_HYPJQ	rac1	G0R7Z3	G0RGF4	Non-specific serine/threonine protein kinase.	Ras small GTPase RAC1.	0.873
G0R7Z3_HYPJQ	rho3	G0R7Z3	G0RRL9	Non-specific serine/threonine protein kinase.	Small GTPase rho3.	0.546
G0R8H1_HYPJQ	G0R7Z3_HYPJQ	G0R8H1	G0R7Z3	Small RAS-like GTPase, rho family.	Non-specific serine/threonine protein kinase.	0.546
G0R8H1_HYPJQ	G0R9Q1_HYPJQ	G0R8H1	G0R9Q1	Small RAS-like GTPase, rho family.	GTPase-activator protein for Rho-like GTPase.	0.999
G0R8H1_HYPJQ	G0RAH0_HYPJQ	G0R8H1	G0RAH0	Small RAS-like GTPase, rho family.	Predicted protein.	0.625