40 items (Trichoderma reesei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G0RGN5_HYPJQ	Predicted protein. (288 aa)
	G0RH89_HYPJQ	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family. (276 aa)
	G0RXM2_HYPJQ	Predicted protein. (745 aa)
	G0RVP5_HYPJQ	Predicted protein. (731 aa)
	G0RRQ6_HYPJQ	High-affinity iron permease-like protein. (367 aa)
	G0RRK2_HYPJQ	Predicted protein. (1006 aa)
	G0RRK1_HYPJQ	Serine protease-like protein; Belongs to the peptidase S8 family. (541 aa)
	G0RQL3_HYPJQ	Predicted protein. (1479 aa)
	G0RPV3_HYPJQ	Predicted protein. (2670 aa)
	G0RPS8_HYPJQ	Predicted protein. (625 aa)
	G0RNB0_HYPJQ	Carbohydrate esterase family 9. (437 aa)
	G0RN68_HYPJQ	Predicted protein. (447 aa)
	G0RMQ0_HYPJQ	Predicted protein. (1349 aa)
	G0RMM0_HYPJQ	N-terminal fungal transcription regulatory domain-containing protein. (367 aa)
	G0RMG9_HYPJQ	Predicted protein. (579 aa)
	G0RLM7_HYPJQ	Predicted protein. (608 aa)
	G0RL66_HYPJQ	Predicted protein. (631 aa)
	G0RKF8_HYPJQ	Predicted protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family. (468 aa)
	G0RIZ1_HYPJQ	Vacuolar sorting protein. (1264 aa)
	G0RII1_HYPJQ	Predicted protein. (826 aa)
	G0RI86_HYPJQ	Predicted protein. (549 aa)
	G0RHN6_HYPJQ	Translation initiation factor kinase. (1609 aa)
	G0RVB9_HYPJQ	Ferric reductase-like transmembrane component. (659 aa)
	G0RV45_HYPJQ	Protease-like protein; Belongs to the protein kinase superfamily. (358 aa)
	G0RHM5_HYPJQ	Predicted protein. (358 aa)
	G0RHD7_HYPJQ	Integral membrane protein. (922 aa)
	G0RS66_HYPJQ	Predicted protein. (582 aa)
	G0RVW2_HYPJQ	Non-ribosomal peptide synthetase, siderophore synthesis. (4876 aa)
	G0RWE1_HYPJQ	Predicted protein. (511 aa)
	G0RXA8_HYPJQ	Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. (576 aa)
	G0RXG6_HYPJQ	Predicted protein. (272 aa)
	G0RXJ5_HYPJQ	Predicted protein. (1104 aa)
	G0RVF5_HYPJQ	Predicted protein. (272 aa)
	G0R6V0_HYPJQ	Predicted protein. (368 aa)
	G0R864_HYPJQ	Predicted protein. (842 aa)
	G0R8D2_HYPJQ	Iron permease-like protein. (348 aa)
	G0RAN2_HYPJQ	Predicted protein. (1167 aa)
	G0RAU1_HYPJQ	Predicted protein. (373 aa)
	G0RBM3_HYPJQ	Predicted protein. (701 aa)
	G0RDJ3_HYPJQ	Protein phosphatase; Belongs to the PP2C family. (398 aa)

Your Current Organism:

Trichoderma reesei

NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G0R6V0_HYPJQ	G0RHM5_HYPJQ	G0R6V0	G0RHM5	Predicted protein.	Predicted protein.	0.999
G0R6V0_HYPJQ	G0RKF8_HYPJQ	G0R6V0	G0RKF8	Predicted protein.	Predicted protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.533
G0R6V0_HYPJQ	G0RMQ0_HYPJQ	G0R6V0	G0RMQ0	Predicted protein.	Predicted protein.	0.988
G0R6V0_HYPJQ	G0RN68_HYPJQ	G0R6V0	G0RN68	Predicted protein.	Predicted protein.	0.940
G0R6V0_HYPJQ	G0RQL3_HYPJQ	G0R6V0	G0RQL3	Predicted protein.	Predicted protein.	0.812
G0RHM5_HYPJQ	G0R6V0_HYPJQ	G0RHM5	G0R6V0	Predicted protein.	Predicted protein.	0.999
G0RHM5_HYPJQ	G0RKF8_HYPJQ	G0RHM5	G0RKF8	Predicted protein.	Predicted protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.527
G0RHM5_HYPJQ	G0RMQ0_HYPJQ	G0RHM5	G0RMQ0	Predicted protein.	Predicted protein.	0.994
G0RHM5_HYPJQ	G0RN68_HYPJQ	G0RHM5	G0RN68	Predicted protein.	Predicted protein.	0.977
G0RHM5_HYPJQ	G0RQL3_HYPJQ	G0RHM5	G0RQL3	Predicted protein.	Predicted protein.	0.849
G0RHN6_HYPJQ	G0RMQ0_HYPJQ	G0RHN6	G0RMQ0	Translation initiation factor kinase.	Predicted protein.	0.942
G0RHN6_HYPJQ	G0RPV3_HYPJQ	G0RHN6	G0RPV3	Translation initiation factor kinase.	Predicted protein.	0.810
G0RKF8_HYPJQ	G0R6V0_HYPJQ	G0RKF8	G0R6V0	Predicted protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	Predicted protein.	0.533
G0RKF8_HYPJQ	G0RHM5_HYPJQ	G0RKF8	G0RHM5	Predicted protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	Predicted protein.	0.527
G0RKF8_HYPJQ	G0RMQ0_HYPJQ	G0RKF8	G0RMQ0	Predicted protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	Predicted protein.	0.551
G0RMQ0_HYPJQ	G0R6V0_HYPJQ	G0RMQ0	G0R6V0	Predicted protein.	Predicted protein.	0.988
G0RMQ0_HYPJQ	G0RHM5_HYPJQ	G0RMQ0	G0RHM5	Predicted protein.	Predicted protein.	0.994
G0RMQ0_HYPJQ	G0RHN6_HYPJQ	G0RMQ0	G0RHN6	Predicted protein.	Translation initiation factor kinase.	0.942
G0RMQ0_HYPJQ	G0RKF8_HYPJQ	G0RMQ0	G0RKF8	Predicted protein.	Predicted protein; Involved in DNA replication and cell separation. Belongs to the SDS23 family.	0.551
G0RMQ0_HYPJQ	G0RN68_HYPJQ	G0RMQ0	G0RN68	Predicted protein.	Predicted protein.	0.750