(15 nodes) SCF ubiquitin ligase complex network (Trichoderma reesei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G0RW35_HYPJQ	Predicted protein. (304 aa)
	G0RBR7_HYPJQ	Predicted protein. (1103 aa)
	G0RHN5_HYPJQ	Predicted protein. (224 aa)
	G0RJ22_HYPJQ	Predicted protein. (636 aa)
	G0RJ26_HYPJQ	Predicted protein. (667 aa)
	G0RJ60_HYPJQ	Predicted protein. (115 aa)
	G0RND5_HYPJQ	Predicted protein. (539 aa)
	G0RVT2_HYPJQ	Predicted protein. (532 aa)
	G0RP80_HYPJQ	Predicted protein. (919 aa)
	G0RRZ9_HYPJQ	Uncharacterized protein. (644 aa)
	G0RX65_HYPJQ	Predicted protein. (1023 aa)
	G0R804_HYPJQ	Predicted protein. (683 aa)
	G0R9Y4_HYPJQ	Predicted protein; Belongs to the cullin family. (727 aa)
	G0RTH9_HYPJQ	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (103 aa)
	G0RA91_HYPJQ	Predicted protein. (581 aa)

Your Current Organism:

Trichoderma reesei

NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G0R804_HYPJQ	G0R9Y4_HYPJQ	G0R804	G0R9Y4	Predicted protein.	Predicted protein; Belongs to the cullin family.	0.586
G0R804_HYPJQ	G0RJ60_HYPJQ	G0R804	G0RJ60	Predicted protein.	Predicted protein.	0.610
G0R9Y4_HYPJQ	G0R804_HYPJQ	G0R9Y4	G0R804	Predicted protein; Belongs to the cullin family.	Predicted protein.	0.586
G0R9Y4_HYPJQ	G0RBR7_HYPJQ	G0R9Y4	G0RBR7	Predicted protein; Belongs to the cullin family.	Predicted protein.	0.774
G0R9Y4_HYPJQ	G0RHN5_HYPJQ	G0R9Y4	G0RHN5	Predicted protein; Belongs to the cullin family.	Predicted protein.	0.888
G0R9Y4_HYPJQ	G0RJ22_HYPJQ	G0R9Y4	G0RJ22	Predicted protein; Belongs to the cullin family.	Predicted protein.	0.988
G0R9Y4_HYPJQ	G0RJ26_HYPJQ	G0R9Y4	G0RJ26	Predicted protein; Belongs to the cullin family.	Predicted protein.	0.851
G0R9Y4_HYPJQ	G0RJ60_HYPJQ	G0R9Y4	G0RJ60	Predicted protein; Belongs to the cullin family.	Predicted protein.	0.997
G0R9Y4_HYPJQ	G0RND5_HYPJQ	G0R9Y4	G0RND5	Predicted protein; Belongs to the cullin family.	Predicted protein.	0.856
G0R9Y4_HYPJQ	G0RP80_HYPJQ	G0R9Y4	G0RP80	Predicted protein; Belongs to the cullin family.	Predicted protein.	0.851
G0R9Y4_HYPJQ	G0RRZ9_HYPJQ	G0R9Y4	G0RRZ9	Predicted protein; Belongs to the cullin family.	Uncharacterized protein.	0.965
G0R9Y4_HYPJQ	G0RTH9_HYPJQ	G0R9Y4	G0RTH9	Predicted protein; Belongs to the cullin family.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.730
G0R9Y4_HYPJQ	G0RVT2_HYPJQ	G0R9Y4	G0RVT2	Predicted protein; Belongs to the cullin family.	Predicted protein.	0.956
G0R9Y4_HYPJQ	G0RX65_HYPJQ	G0R9Y4	G0RX65	Predicted protein; Belongs to the cullin family.	Predicted protein.	0.986
G0RBR7_HYPJQ	G0R9Y4_HYPJQ	G0RBR7	G0R9Y4	Predicted protein.	Predicted protein; Belongs to the cullin family.	0.774
G0RBR7_HYPJQ	G0RJ60_HYPJQ	G0RBR7	G0RJ60	Predicted protein.	Predicted protein.	0.821
G0RHN5_HYPJQ	G0R9Y4_HYPJQ	G0RHN5	G0R9Y4	Predicted protein.	Predicted protein; Belongs to the cullin family.	0.888
G0RHN5_HYPJQ	G0RJ22_HYPJQ	G0RHN5	G0RJ22	Predicted protein.	Predicted protein.	0.597
G0RHN5_HYPJQ	G0RJ26_HYPJQ	G0RHN5	G0RJ26	Predicted protein.	Predicted protein.	0.497
G0RHN5_HYPJQ	G0RJ60_HYPJQ	G0RHN5	G0RJ60	Predicted protein.	Predicted protein.	0.985