(16 nodes) AAA ATPase, AAA+ lid domain network (Trichoderma reesei)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G0R7H9_HYPJQ	Predicted protein. (900 aa)
	G0RX50_HYPJQ	Predicted protein; Belongs to the AAA ATPase family. (407 aa)
	G0RUD7_HYPJQ	Vacuolar sorting protein; Belongs to the AAA ATPase family. (431 aa)
	G0RU92_HYPJQ	Predicted protein; Belongs to the AAA ATPase family. (456 aa)
	G0RRW2_HYPJQ	Predicted protein; Belongs to the AAA ATPase family. (818 aa)
	G0RQT1_HYPJQ	Predicted protein; Belongs to the AAA ATPase family. (457 aa)
	G0RQ92_HYPJQ	Predicted protein. (982 aa)
	G0RM89_HYPJQ	Predicted protein; Belongs to the AAA ATPase family. (391 aa)
	G0RLG9_HYPJQ	Predicted protein; Belongs to the AAA ATPase family. (389 aa)
	G0RL15_HYPJQ	Predicted protein. (763 aa)
	nsf1	Vesicle fusion factor. (822 aa)
	G0RIS6_HYPJQ	Predicted protein; Belongs to the AAA ATPase family. (760 aa)
	G0RG93_HYPJQ	Predicted protein. (785 aa)
	G0REC4_HYPJQ	Predicted protein. (1230 aa)
	G0RCX2_HYPJQ	Predicted protein. (1631 aa)
	G0R9A5_HYPJQ	Predicted protein; Belongs to the AAA ATPase family. (440 aa)

Your Current Organism:

Trichoderma reesei

NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G0R7H9_HYPJQ	G0RL15_HYPJQ	G0R7H9	G0RL15	Predicted protein.	Predicted protein.	0.490
G0R9A5_HYPJQ	G0RG93_HYPJQ	G0R9A5	G0RG93	Predicted protein; Belongs to the AAA ATPase family.	Predicted protein.	0.630
G0R9A5_HYPJQ	G0RLG9_HYPJQ	G0R9A5	G0RLG9	Predicted protein; Belongs to the AAA ATPase family.	Predicted protein; Belongs to the AAA ATPase family.	0.999
G0R9A5_HYPJQ	G0RM89_HYPJQ	G0R9A5	G0RM89	Predicted protein; Belongs to the AAA ATPase family.	Predicted protein; Belongs to the AAA ATPase family.	0.999
G0R9A5_HYPJQ	G0RQT1_HYPJQ	G0R9A5	G0RQT1	Predicted protein; Belongs to the AAA ATPase family.	Predicted protein; Belongs to the AAA ATPase family.	0.999
G0R9A5_HYPJQ	G0RRW2_HYPJQ	G0R9A5	G0RRW2	Predicted protein; Belongs to the AAA ATPase family.	Predicted protein; Belongs to the AAA ATPase family.	0.614
G0R9A5_HYPJQ	G0RU92_HYPJQ	G0R9A5	G0RU92	Predicted protein; Belongs to the AAA ATPase family.	Predicted protein; Belongs to the AAA ATPase family.	0.999
G0RCX2_HYPJQ	G0RM89_HYPJQ	G0RCX2	G0RM89	Predicted protein.	Predicted protein; Belongs to the AAA ATPase family.	0.572
G0RCX2_HYPJQ	G0RU92_HYPJQ	G0RCX2	G0RU92	Predicted protein.	Predicted protein; Belongs to the AAA ATPase family.	0.584
G0RG93_HYPJQ	G0R9A5_HYPJQ	G0RG93	G0R9A5	Predicted protein.	Predicted protein; Belongs to the AAA ATPase family.	0.630
G0RG93_HYPJQ	G0RLG9_HYPJQ	G0RG93	G0RLG9	Predicted protein.	Predicted protein; Belongs to the AAA ATPase family.	0.689
G0RG93_HYPJQ	G0RM89_HYPJQ	G0RG93	G0RM89	Predicted protein.	Predicted protein; Belongs to the AAA ATPase family.	0.648
G0RG93_HYPJQ	G0RQT1_HYPJQ	G0RG93	G0RQT1	Predicted protein.	Predicted protein; Belongs to the AAA ATPase family.	0.719
G0RG93_HYPJQ	G0RU92_HYPJQ	G0RG93	G0RU92	Predicted protein.	Predicted protein; Belongs to the AAA ATPase family.	0.693
G0RIS6_HYPJQ	G0RUD7_HYPJQ	G0RIS6	G0RUD7	Predicted protein; Belongs to the AAA ATPase family.	Vacuolar sorting protein; Belongs to the AAA ATPase family.	0.699
G0RL15_HYPJQ	G0R7H9_HYPJQ	G0RL15	G0R7H9	Predicted protein.	Predicted protein.	0.490
G0RLG9_HYPJQ	G0R9A5_HYPJQ	G0RLG9	G0R9A5	Predicted protein; Belongs to the AAA ATPase family.	Predicted protein; Belongs to the AAA ATPase family.	0.999
G0RLG9_HYPJQ	G0RG93_HYPJQ	G0RLG9	G0RG93	Predicted protein; Belongs to the AAA ATPase family.	Predicted protein.	0.689
G0RLG9_HYPJQ	G0RM89_HYPJQ	G0RLG9	G0RM89	Predicted protein; Belongs to the AAA ATPase family.	Predicted protein; Belongs to the AAA ATPase family.	0.999
G0RLG9_HYPJQ	G0RQT1_HYPJQ	G0RLG9	G0RQT1	Predicted protein; Belongs to the AAA ATPase family.	Predicted protein; Belongs to the AAA ATPase family.	0.999