29 items (Trichoderma reesei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G0RBR4_HYPJQ	Predicted protein. (225 aa)
	G0RBM3_HYPJQ	Predicted protein. (701 aa)
	G0RB49_HYPJQ	Predicted protein. (132 aa)
	G0RAZ2_HYPJQ	Predicted protein. (102 aa)
	G0RAN2_HYPJQ	Predicted protein. (1167 aa)
	G0R7I2_HYPJQ	Uncharacterized protein. (318 aa)
	G0RXJ5_HYPJQ	Predicted protein. (1104 aa)
	G0RXG6_HYPJQ	Predicted protein. (272 aa)
	G0RSW4_HYPJQ	Predicted protein. (146 aa)
	G0RSJ9_HYPJQ	Uncharacterized protein. (285 aa)
	G0RS88_HYPJQ	Predicted protein. (415 aa)
	G0RS66_HYPJQ	Predicted protein. (582 aa)
	G0RPS8_HYPJQ	Predicted protein. (625 aa)
	G0RW56_HYPJQ	Predicted protein. (372 aa)
	G0RVF5_HYPJQ	Predicted protein. (272 aa)
	G0RTQ1_HYPJQ	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
	G0RK48_HYPJQ	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (143 aa)
	G0RKJ7_HYPJQ	Predicted protein. (713 aa)
	G0RL66_HYPJQ	Predicted protein. (631 aa)
	G0RIE0_HYPJQ	Predicted protein. (146 aa)
	G0RI89_HYPJQ	Predicted protein. (1316 aa)
	G0RHP2_HYPJQ	Predicted protein. (452 aa)
	G0RHK7_HYPJQ	Predicted protein. (529 aa)
	G0RH89_HYPJQ	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family. (276 aa)
	G0RH48_HYPJQ	Predicted protein. (420 aa)
	G0RGZ4_HYPJQ	Predicted protein. (610 aa)
	G0REL5_HYPJQ	Phosphotransferase. (483 aa)
	G0RDE1_HYPJQ	Predicted protein. (276 aa)
	G0RD72_HYPJQ	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family. (290 aa)

Your Current Organism:

Trichoderma reesei

NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G0R7I2_HYPJQ	G0RD72_HYPJQ	G0R7I2	G0RD72	Uncharacterized protein.	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.996
G0R7I2_HYPJQ	G0RH89_HYPJQ	G0R7I2	G0RH89	Uncharacterized protein.	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.951
G0R7I2_HYPJQ	G0RI89_HYPJQ	G0R7I2	G0RI89	Uncharacterized protein.	Predicted protein.	0.424
G0R7I2_HYPJQ	G0RPS8_HYPJQ	G0R7I2	G0RPS8	Uncharacterized protein.	Predicted protein.	0.424
G0R7I2_HYPJQ	G0RS66_HYPJQ	G0R7I2	G0RS66	Uncharacterized protein.	Predicted protein.	0.424
G0R7I2_HYPJQ	G0RTQ1_HYPJQ	G0R7I2	G0RTQ1	Uncharacterized protein.	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.995
G0R7I2_HYPJQ	G0RVF5_HYPJQ	G0R7I2	G0RVF5	Uncharacterized protein.	Predicted protein.	0.952
G0R7I2_HYPJQ	G0RXG6_HYPJQ	G0R7I2	G0RXG6	Uncharacterized protein.	Predicted protein.	0.941
G0RD72_HYPJQ	G0R7I2_HYPJQ	G0RD72	G0R7I2	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.996
G0RD72_HYPJQ	G0RGZ4_HYPJQ	G0RD72	G0RGZ4	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Predicted protein.	0.647
G0RD72_HYPJQ	G0RH48_HYPJQ	G0RD72	G0RH48	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Predicted protein.	0.447
G0RD72_HYPJQ	G0RHP2_HYPJQ	G0RD72	G0RHP2	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Predicted protein.	0.928
G0RD72_HYPJQ	G0RKJ7_HYPJQ	G0RD72	G0RKJ7	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Predicted protein.	0.638
G0RD72_HYPJQ	G0RPS8_HYPJQ	G0RD72	G0RPS8	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Predicted protein.	0.452
G0RD72_HYPJQ	G0RS66_HYPJQ	G0RD72	G0RS66	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Predicted protein.	0.452
G0RD72_HYPJQ	G0RS88_HYPJQ	G0RD72	G0RS88	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Predicted protein.	0.935
G0RD72_HYPJQ	G0RTQ1_HYPJQ	G0RD72	G0RTQ1	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.920
G0RD72_HYPJQ	G0RXJ5_HYPJQ	G0RD72	G0RXJ5	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	Predicted protein.	0.928
G0RGZ4_HYPJQ	G0RD72_HYPJQ	G0RGZ4	G0RD72	Predicted protein.	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.647
G0RGZ4_HYPJQ	G0RH89_HYPJQ	G0RGZ4	G0RH89	Predicted protein.	Predicted protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.447