14 items (Trichoderma reesei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G0R7Z3_HYPJQ	Non-specific serine/threonine protein kinase. (719 aa)
	G0RC70_HYPJQ	Non-specific serine/threonine protein kinase. (821 aa)
	G0RCR2_HYPJQ	Predicted protein. (323 aa)
	G0RCU2_HYPJQ	Predicted protein. (807 aa)
	G0RD66_HYPJQ	Predicted protein. (663 aa)
	G0RE73_HYPJQ	Predicted protein. (113 aa)
	G0RJ35_HYPJQ	PAK domain-containing protein. (764 aa)
	G0RK35_HYPJQ	RasGAP protein. (1667 aa)
	G0RMQ3_HYPJQ	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. (729 aa)
	G0RNN8_HYPJQ	Predicted protein. (1120 aa)
	cdc42	Cell division control protein. (194 aa)
	G0RRG4_HYPJQ	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1680 aa)
	G0RVR3_HYPJQ	Predicted protein. (129 aa)
	G0RWF2_HYPJQ	Predicted protein. (591 aa)

Your Current Organism:

Trichoderma reesei

NCBI taxonomy Id: 431241
Other names: T. reesei QM6a, Trichoderma reesei QM6a

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G0R7Z3_HYPJQ	G0RC70_HYPJQ	G0R7Z3	G0RC70	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.817
G0R7Z3_HYPJQ	G0RK35_HYPJQ	G0R7Z3	G0RK35	Non-specific serine/threonine protein kinase.	RasGAP protein.	0.563
G0R7Z3_HYPJQ	G0RMQ3_HYPJQ	G0R7Z3	G0RMQ3	Non-specific serine/threonine protein kinase.	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	0.408
G0R7Z3_HYPJQ	G0RNN8_HYPJQ	G0R7Z3	G0RNN8	Non-specific serine/threonine protein kinase.	Predicted protein.	0.532
G0R7Z3_HYPJQ	G0RRG4_HYPJQ	G0R7Z3	G0RRG4	Non-specific serine/threonine protein kinase.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.548
G0R7Z3_HYPJQ	G0RWF2_HYPJQ	G0R7Z3	G0RWF2	Non-specific serine/threonine protein kinase.	Predicted protein.	0.694
G0R7Z3_HYPJQ	cdc42	G0R7Z3	G0RQA2	Non-specific serine/threonine protein kinase.	Cell division control protein.	0.992
G0RC70_HYPJQ	G0R7Z3_HYPJQ	G0RC70	G0R7Z3	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.817
G0RC70_HYPJQ	G0RK35_HYPJQ	G0RC70	G0RK35	Non-specific serine/threonine protein kinase.	RasGAP protein.	0.563
G0RC70_HYPJQ	G0RMQ3_HYPJQ	G0RC70	G0RMQ3	Non-specific serine/threonine protein kinase.	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	0.408
G0RC70_HYPJQ	G0RNN8_HYPJQ	G0RC70	G0RNN8	Non-specific serine/threonine protein kinase.	Predicted protein.	0.532
G0RC70_HYPJQ	G0RRG4_HYPJQ	G0RC70	G0RRG4	Non-specific serine/threonine protein kinase.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.548
G0RC70_HYPJQ	G0RWF2_HYPJQ	G0RC70	G0RWF2	Non-specific serine/threonine protein kinase.	Predicted protein.	0.776
G0RC70_HYPJQ	cdc42	G0RC70	G0RQA2	Non-specific serine/threonine protein kinase.	Cell division control protein.	0.992
G0RCR2_HYPJQ	G0RK35_HYPJQ	G0RCR2	G0RK35	Predicted protein.	RasGAP protein.	0.407
G0RCR2_HYPJQ	G0RRG4_HYPJQ	G0RCR2	G0RRG4	Predicted protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.462
G0RCU2_HYPJQ	G0RK35_HYPJQ	G0RCU2	G0RK35	Predicted protein.	RasGAP protein.	0.417
G0RCU2_HYPJQ	G0RMQ3_HYPJQ	G0RCU2	G0RMQ3	Predicted protein.	Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.	0.609
G0RCU2_HYPJQ	G0RRG4_HYPJQ	G0RCU2	G0RRG4	Predicted protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.653
G0RCU2_HYPJQ	G0RWF2_HYPJQ	G0RCU2	G0RWF2	Predicted protein.	Predicted protein.	0.619