(11 nodes) HYR domain, and Immunoglobulin like network (Anopheles darlingi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AND_009206	Titin. (8216 aa)
	AND_005865	Uncharacterized protein. (2101 aa)
	AND_006817	Insulin-like peptide 2. (147 aa)
	AND_006699	Stretchin-mlck. (2840 aa)
	AND_005922	Uncharacterized protein. (827 aa)
	AND_004966	Uncharacterized protein. (1562 aa)
	AND_003474	Tyrosine-protein kinase. (496 aa)
	AND_003471	Uncharacterized protein. (1303 aa)
	AND_004694	Uncharacterized protein. (291 aa)
	AND_002111	PTK7 protein tyrosine kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1507 aa)
	AND_001760	Unc-89 protein. (5569 aa)

Your Current Organism:

Anopheles darlingi

NCBI taxonomy Id: 43151
Other names: A. darlingi, American malaria mosquito, Anopheles paulistensis, Nyssorhynchus darlingi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AND_001760	AND_002111	W5JT47	W5JPQ3	Unc-89 protein.	PTK7 protein tyrosine kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.833
AND_001760	AND_003471	W5JT47	W5JKV7	Unc-89 protein.	Uncharacterized protein.	0.861
AND_001760	AND_003474	W5JT47	W5JK69	Unc-89 protein.	Tyrosine-protein kinase.	0.843
AND_001760	AND_004694	W5JT47	W5JKZ8	Unc-89 protein.	Uncharacterized protein.	0.861
AND_001760	AND_004966	W5JT47	W5JJ30	Unc-89 protein.	Uncharacterized protein.	0.975
AND_001760	AND_005865	W5JT47	W5JEG9	Unc-89 protein.	Uncharacterized protein.	0.975
AND_001760	AND_005922	W5JT47	W5JGC4	Unc-89 protein.	Uncharacterized protein.	0.975
AND_001760	AND_006699	W5JT47	W5JFP8	Unc-89 protein.	Stretchin-mlck.	0.975
AND_001760	AND_006817	W5JT47	W5JF57	Unc-89 protein.	Insulin-like peptide 2.	0.642
AND_001760	AND_009206	W5JT47	W5J457	Unc-89 protein.	Titin.	0.814
AND_002111	AND_001760	W5JPQ3	W5JT47	PTK7 protein tyrosine kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Unc-89 protein.	0.833
AND_002111	AND_003471	W5JPQ3	W5JKV7	PTK7 protein tyrosine kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.881
AND_002111	AND_003474	W5JPQ3	W5JK69	PTK7 protein tyrosine kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Tyrosine-protein kinase.	0.824
AND_002111	AND_004694	W5JPQ3	W5JKZ8	PTK7 protein tyrosine kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.881
AND_002111	AND_004966	W5JPQ3	W5JJ30	PTK7 protein tyrosine kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.983
AND_002111	AND_005865	W5JPQ3	W5JEG9	PTK7 protein tyrosine kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.983
AND_002111	AND_005922	W5JPQ3	W5JGC4	PTK7 protein tyrosine kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.983
AND_002111	AND_006699	W5JPQ3	W5JFP8	PTK7 protein tyrosine kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Stretchin-mlck.	0.983
AND_002111	AND_006817	W5JPQ3	W5JF57	PTK7 protein tyrosine kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Insulin-like peptide 2.	0.967
AND_002111	AND_009206	W5JPQ3	W5J457	PTK7 protein tyrosine kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Titin.	0.969