5 items (Anopheles darlingi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AND_009786	E2F_TDP domain-containing protein. (422 aa)
	AND_007010	DIRP domain-containing protein. (591 aa)
	AND_005973	Uncharacterized protein. (957 aa)
	AND_004858	E2F_TDP domain-containing protein. (807 aa)
	AND_001304	Transcription factor dp. (512 aa)

Your Current Organism:

Anopheles darlingi

NCBI taxonomy Id: 43151
Other names: A. darlingi, American malaria mosquito, Anopheles paulistensis, Nyssorhynchus darlingi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AND_001304	AND_004858	W5JUF9	W5JH88	Transcription factor dp.	E2F_TDP domain-containing protein.	0.992
AND_001304	AND_005973	W5JUF9	W5JE43	Transcription factor dp.	Uncharacterized protein.	0.992
AND_001304	AND_007010	W5JUF9	W5JBF6	Transcription factor dp.	DIRP domain-containing protein.	0.881
AND_001304	AND_009786	W5JUF9	W5J6Z4	Transcription factor dp.	E2F_TDP domain-containing protein.	0.996
AND_004858	AND_001304	W5JH88	W5JUF9	E2F_TDP domain-containing protein.	Transcription factor dp.	0.992
AND_004858	AND_005973	W5JH88	W5JE43	E2F_TDP domain-containing protein.	Uncharacterized protein.	0.990
AND_004858	AND_007010	W5JH88	W5JBF6	E2F_TDP domain-containing protein.	DIRP domain-containing protein.	0.882
AND_004858	AND_009786	W5JH88	W5J6Z4	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.955
AND_005973	AND_001304	W5JE43	W5JUF9	Uncharacterized protein.	Transcription factor dp.	0.992
AND_005973	AND_004858	W5JE43	W5JH88	Uncharacterized protein.	E2F_TDP domain-containing protein.	0.990
AND_005973	AND_007010	W5JE43	W5JBF6	Uncharacterized protein.	DIRP domain-containing protein.	0.963
AND_005973	AND_009786	W5JE43	W5J6Z4	Uncharacterized protein.	E2F_TDP domain-containing protein.	0.997
AND_007010	AND_001304	W5JBF6	W5JUF9	DIRP domain-containing protein.	Transcription factor dp.	0.881
AND_007010	AND_004858	W5JBF6	W5JH88	DIRP domain-containing protein.	E2F_TDP domain-containing protein.	0.882
AND_007010	AND_005973	W5JBF6	W5JE43	DIRP domain-containing protein.	Uncharacterized protein.	0.963
AND_007010	AND_009786	W5JBF6	W5J6Z4	DIRP domain-containing protein.	E2F_TDP domain-containing protein.	0.910
AND_009786	AND_001304	W5J6Z4	W5JUF9	E2F_TDP domain-containing protein.	Transcription factor dp.	0.996
AND_009786	AND_004858	W5J6Z4	W5JH88	E2F_TDP domain-containing protein.	E2F_TDP domain-containing protein.	0.955
AND_009786	AND_005973	W5J6Z4	W5JE43	E2F_TDP domain-containing protein.	Uncharacterized protein.	0.997
AND_009786	AND_007010	W5J6Z4	W5JBF6	E2F_TDP domain-containing protein.	DIRP domain-containing protein.	0.910