12 items (Anopheles darlingi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AND_006172	Putative vesicle coat complex copii gtpase subunit sar1; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	AND_006431	Ghost. (1113 aa)
	AND_001733	Membrin. (197 aa)
	AND_001244	Transport protein SEC13; Belongs to the WD repeat SEC13 family. (317 aa)
	AND_007416	Vesicle docking protein P115. (896 aa)
	AND_003830	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (768 aa)
	AND_002582	Transport protein SEC22; Belongs to the synaptobrevin family. (211 aa)
	AND_002918	Transport protein SEC24. (1270 aa)
	AND_004620	Sec16_C domain-containing protein. (1230 aa)
	AND_005435	SNARE Vti1a protein. (216 aa)
	AND_000994	Pef protein with a long n-terminal hydrophobic domain (Peflin). (212 aa)
	AND_001487	Vesicle associated protein. (1342 aa)

Your Current Organism:

Anopheles darlingi

NCBI taxonomy Id: 43151
Other names: A. darlingi, American malaria mosquito, Anopheles paulistensis, Nyssorhynchus darlingi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AND_000994	AND_001244	W5JW63	W5JVR8	Pef protein with a long n-terminal hydrophobic domain (Peflin).	Transport protein SEC13; Belongs to the WD repeat SEC13 family.	0.496
AND_000994	AND_001487	W5JW63	W5JTV5	Pef protein with a long n-terminal hydrophobic domain (Peflin).	Vesicle associated protein.	0.946
AND_001244	AND_000994	W5JVR8	W5JW63	Transport protein SEC13; Belongs to the WD repeat SEC13 family.	Pef protein with a long n-terminal hydrophobic domain (Peflin).	0.496
AND_001244	AND_001487	W5JVR8	W5JTV5	Transport protein SEC13; Belongs to the WD repeat SEC13 family.	Vesicle associated protein.	0.999
AND_001244	AND_001733	W5JVR8	W5JU64	Transport protein SEC13; Belongs to the WD repeat SEC13 family.	Membrin.	0.815
AND_001244	AND_002582	W5JVR8	W5JNC6	Transport protein SEC13; Belongs to the WD repeat SEC13 family.	Transport protein SEC22; Belongs to the synaptobrevin family.	0.895
AND_001244	AND_002918	W5JVR8	W5JMF3	Transport protein SEC13; Belongs to the WD repeat SEC13 family.	Transport protein SEC24.	0.998
AND_001244	AND_003830	W5JVR8	W5JNW3	Transport protein SEC13; Belongs to the WD repeat SEC13 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.998
AND_001244	AND_004620	W5JVR8	W5JK20	Transport protein SEC13; Belongs to the WD repeat SEC13 family.	Sec16_C domain-containing protein.	0.998
AND_001244	AND_006172	W5JVR8	W5JFN0	Transport protein SEC13; Belongs to the WD repeat SEC13 family.	Putative vesicle coat complex copii gtpase subunit sar1; Belongs to the small GTPase superfamily. SAR1 family.	0.953
AND_001244	AND_006431	W5JVR8	W5JEZ8	Transport protein SEC13; Belongs to the WD repeat SEC13 family.	Ghost.	0.998
AND_001244	AND_007416	W5JVR8	W5JDT6	Transport protein SEC13; Belongs to the WD repeat SEC13 family.	Vesicle docking protein P115.	0.578
AND_001487	AND_000994	W5JTV5	W5JW63	Vesicle associated protein.	Pef protein with a long n-terminal hydrophobic domain (Peflin).	0.946
AND_001487	AND_001244	W5JTV5	W5JVR8	Vesicle associated protein.	Transport protein SEC13; Belongs to the WD repeat SEC13 family.	0.999
AND_001487	AND_001733	W5JTV5	W5JU64	Vesicle associated protein.	Membrin.	0.745
AND_001487	AND_002582	W5JTV5	W5JNC6	Vesicle associated protein.	Transport protein SEC22; Belongs to the synaptobrevin family.	0.895
AND_001487	AND_002918	W5JTV5	W5JMF3	Vesicle associated protein.	Transport protein SEC24.	0.998
AND_001487	AND_003830	W5JTV5	W5JNW3	Vesicle associated protein.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.998
AND_001487	AND_004620	W5JTV5	W5JK20	Vesicle associated protein.	Sec16_C domain-containing protein.	0.969
AND_001487	AND_006172	W5JTV5	W5JFN0	Vesicle associated protein.	Putative vesicle coat complex copii gtpase subunit sar1; Belongs to the small GTPase superfamily. SAR1 family.	0.993