12 items (Anopheles darlingi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AND_001356	Pita. (688 aa)
	AND_000716	DNA helicase; Belongs to the MCM family. (733 aa)
	AND_001366	Zinc finger protein. (121 aa)
	AND_009786	E2F_TDP domain-containing protein. (422 aa)
	AND_009607	Fork head. (511 aa)
	AND_010478	Archipelago. (1642 aa)
	AND_010197	Tyrosine-protein kinase. (691 aa)
	AND_007813	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (524 aa)
	AND_005973	Uncharacterized protein. (957 aa)
	AND_002295	WD repeat and HMG-box DNA-binding protein 1. (1005 aa)
	AND_002299	DNA replication factor Cdt1. (702 aa)
	AND_000448	CAF1-p150_C2 domain-containing protein. (663 aa)

Your Current Organism:

Anopheles darlingi

NCBI taxonomy Id: 43151
Other names: A. darlingi, American malaria mosquito, Anopheles paulistensis, Nyssorhynchus darlingi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AND_000448	AND_000716	W5JTJ5	W5JTL1	CAF1-p150_C2 domain-containing protein.	DNA helicase; Belongs to the MCM family.	0.875
AND_000448	AND_002299	W5JTJ5	W5JT66	CAF1-p150_C2 domain-containing protein.	DNA replication factor Cdt1.	0.655
AND_000716	AND_000448	W5JTL1	W5JTJ5	DNA helicase; Belongs to the MCM family.	CAF1-p150_C2 domain-containing protein.	0.875
AND_000716	AND_002295	W5JTL1	W5JT50	DNA helicase; Belongs to the MCM family.	WD repeat and HMG-box DNA-binding protein 1.	0.998
AND_000716	AND_002299	W5JTL1	W5JT66	DNA helicase; Belongs to the MCM family.	DNA replication factor Cdt1.	0.999
AND_000716	AND_005973	W5JTL1	W5JE43	DNA helicase; Belongs to the MCM family.	Uncharacterized protein.	0.684
AND_000716	AND_007813	W5JTL1	W5J996	DNA helicase; Belongs to the MCM family.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.997
AND_000716	AND_009786	W5JTL1	W5J6Z4	DNA helicase; Belongs to the MCM family.	E2F_TDP domain-containing protein.	0.408
AND_002295	AND_000716	W5JT50	W5JTL1	WD repeat and HMG-box DNA-binding protein 1.	DNA helicase; Belongs to the MCM family.	0.998
AND_002295	AND_002299	W5JT50	W5JT66	WD repeat and HMG-box DNA-binding protein 1.	DNA replication factor Cdt1.	0.842
AND_002295	AND_007813	W5JT50	W5J996	WD repeat and HMG-box DNA-binding protein 1.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.993
AND_002299	AND_000448	W5JT66	W5JTJ5	DNA replication factor Cdt1.	CAF1-p150_C2 domain-containing protein.	0.655
AND_002299	AND_000716	W5JT66	W5JTL1	DNA replication factor Cdt1.	DNA helicase; Belongs to the MCM family.	0.999
AND_002299	AND_002295	W5JT66	W5JT50	DNA replication factor Cdt1.	WD repeat and HMG-box DNA-binding protein 1.	0.842
AND_002299	AND_005973	W5JT66	W5JE43	DNA replication factor Cdt1.	Uncharacterized protein.	0.534
AND_002299	AND_007813	W5JT66	W5J996	DNA replication factor Cdt1.	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.	0.656
AND_002299	AND_009786	W5JT66	W5J6Z4	DNA replication factor Cdt1.	E2F_TDP domain-containing protein.	0.415
AND_005973	AND_000716	W5JE43	W5JTL1	Uncharacterized protein.	DNA helicase; Belongs to the MCM family.	0.684
AND_005973	AND_002299	W5JE43	W5JT66	Uncharacterized protein.	DNA replication factor Cdt1.	0.534
AND_005973	AND_009786	W5JE43	W5J6Z4	Uncharacterized protein.	E2F_TDP domain-containing protein.	0.997