26 items (Anopheles darlingi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AND_003680	SET domain-containing protein. (375 aa)
	AND_005262	Uncharacterized protein. (1658 aa)
	AND_006043	Uncharacterized protein. (578 aa)
	AND_005431	Prohibitin. (272 aa)
	AND_007277	Uncharacterized protein. (493 aa)
	AND_008279	Uncharacterized protein. (522 aa)
	AND_009068	Breast cancer metastasis-suppressor. (236 aa)
	AND_009867	Methyl-cpg binding protein, mbd. (316 aa)
	AND_008848	Retinoblastoma-binding protein 4 (Rbbp4). (429 aa)
	AND_010578	Metastasis-associated protein MTA. (945 aa)
	AND_010137	Uncharacterized protein. (1574 aa)
	AND_009912	SET and MYND domain protein 4. (664 aa)
	AND_002353	Mesoderm induction early response protein 1. (357 aa)
	AND_002843	MYND-type domain-containing protein. (675 aa)
	AND_009794	DNA-binding protein rfxank. (214 aa)
	AND_002704	Myocyte-specific enhancer factor 2d. (729 aa)
	AND_002531	SET domain-containing protein. (648 aa)
	AND_002530	MYND-type domain-containing protein. (665 aa)
	AND_000669	SET domain-containing protein. (565 aa)
	AND_000885	SET domain-containing protein. (508 aa)
	AND_001839	Msta. (499 aa)
	AND_000038	Uncharacterized protein. (506 aa)
	AND_000007	MYND-type domain-containing protein. (545 aa)
	AND_001011	Suppressor of defective silencing. (390 aa)
	AND_000960	Uncharacterized protein. (747 aa)
	AND_000525	Uncharacterized protein. (199 aa)

Your Current Organism:

Anopheles darlingi

NCBI taxonomy Id: 43151
Other names: A. darlingi, American malaria mosquito, Anopheles paulistensis, Nyssorhynchus darlingi

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AND_000007	AND_000669	W5JUW8	W5JT12	MYND-type domain-containing protein.	SET domain-containing protein.	0.401
AND_000007	AND_008848	W5JUW8	W5J4Z6	MYND-type domain-containing protein.	Retinoblastoma-binding protein 4 (Rbbp4).	0.778
AND_000669	AND_000007	W5JT12	W5JUW8	SET domain-containing protein.	MYND-type domain-containing protein.	0.401
AND_000669	AND_000885	W5JT12	W5JT41	SET domain-containing protein.	SET domain-containing protein.	0.445
AND_000669	AND_000960	W5JT12	W5JW85	SET domain-containing protein.	Uncharacterized protein.	0.516
AND_000669	AND_001839	W5JT12	W5JTU7	SET domain-containing protein.	Msta.	0.584
AND_000669	AND_002530	W5JT12	W5JSF9	SET domain-containing protein.	MYND-type domain-containing protein.	0.477
AND_000669	AND_002531	W5JT12	W5JRZ4	SET domain-containing protein.	SET domain-containing protein.	0.442
AND_000669	AND_002843	W5JT12	W5JR64	SET domain-containing protein.	MYND-type domain-containing protein.	0.647
AND_000669	AND_003680	W5JT12	W5JJL8	SET domain-containing protein.	SET domain-containing protein.	0.591
AND_000669	AND_006043	W5JT12	W5JHI3	SET domain-containing protein.	Uncharacterized protein.	0.591
AND_000669	AND_008279	W5JT12	W5J9M1	SET domain-containing protein.	Uncharacterized protein.	0.408
AND_000669	AND_008848	W5JT12	W5J4Z6	SET domain-containing protein.	Retinoblastoma-binding protein 4 (Rbbp4).	0.778
AND_000669	AND_009912	W5JT12	W5J3R6	SET domain-containing protein.	SET and MYND domain protein 4.	0.516
AND_000885	AND_000669	W5JT41	W5JT12	SET domain-containing protein.	SET domain-containing protein.	0.445
AND_000885	AND_001839	W5JT41	W5JTU7	SET domain-containing protein.	Msta.	0.477
AND_000885	AND_003680	W5JT41	W5JJL8	SET domain-containing protein.	SET domain-containing protein.	0.482
AND_000885	AND_006043	W5JT41	W5JHI3	SET domain-containing protein.	Uncharacterized protein.	0.461
AND_000885	AND_008848	W5JT41	W5J4Z6	SET domain-containing protein.	Retinoblastoma-binding protein 4 (Rbbp4).	0.778
AND_000960	AND_000669	W5JW85	W5JT12	Uncharacterized protein.	SET domain-containing protein.	0.516