(13 nodes) Cadherin binding network (Anopheles darlingi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AND_004945	Armadillo. (748 aa)
	AND_004958	Uncharacterized protein. (127 aa)
	AND_002629	Abl interactor 2. (384 aa)
	AND_002601	RING-type domain-containing protein. (384 aa)
	AND_002039	Uncharacterized protein. (252 aa)
	AND_010503	Guanyl-nucleotide exchange factor. (1148 aa)
	AND_008827	N-myc downstream regulated. (351 aa)
	AND_009080	Cadherin. (2015 aa)
	AND_008152	Cadherin-related tumor suppressor fat. (5262 aa)
	AND_006801	Thioredoxin domain-containing protein 9. (230 aa)
	AND_007538	Actin binding protein. (911 aa)
	AND_006682	Uncharacterized protein. (408 aa)
	AND_006624	Plakophilin-4. (1015 aa)

Your Current Organism:

Anopheles darlingi

NCBI taxonomy Id: 43151
Other names: A. darlingi, American malaria mosquito, Anopheles paulistensis, Nyssorhynchus darlingi

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AND_002601	AND_006624	W5JNB4	W5JFN7	RING-type domain-containing protein.	Plakophilin-4.	0.472
AND_002629	AND_006682	W5JMJ9	W5JFJ3	Abl interactor 2.	Uncharacterized protein.	0.548
AND_004945	AND_006624	W5JKN4	W5JFN7	Armadillo.	Plakophilin-4.	0.910
AND_004945	AND_006682	W5JKN4	W5JFJ3	Armadillo.	Uncharacterized protein.	0.414
AND_004945	AND_007538	W5JKN4	W5JD52	Armadillo.	Actin binding protein.	0.982
AND_004945	AND_009080	W5JKN4	W5J5P8	Armadillo.	Cadherin.	0.798
AND_004958	AND_006624	W5JJ62	W5JFN7	Uncharacterized protein.	Plakophilin-4.	0.959
AND_004958	AND_006682	W5JJ62	W5JFJ3	Uncharacterized protein.	Uncharacterized protein.	0.414
AND_004958	AND_007538	W5JJ62	W5JD52	Uncharacterized protein.	Actin binding protein.	0.982
AND_004958	AND_009080	W5JJ62	W5J5P8	Uncharacterized protein.	Cadherin.	0.798
AND_006624	AND_002601	W5JFN7	W5JNB4	Plakophilin-4.	RING-type domain-containing protein.	0.472
AND_006624	AND_004945	W5JFN7	W5JKN4	Plakophilin-4.	Armadillo.	0.910
AND_006624	AND_004958	W5JFN7	W5JJ62	Plakophilin-4.	Uncharacterized protein.	0.959
AND_006624	AND_007538	W5JFN7	W5JD52	Plakophilin-4.	Actin binding protein.	0.982
AND_006624	AND_009080	W5JFN7	W5J5P8	Plakophilin-4.	Cadherin.	0.821
AND_006682	AND_002629	W5JFJ3	W5JMJ9	Uncharacterized protein.	Abl interactor 2.	0.548
AND_006682	AND_004945	W5JFJ3	W5JKN4	Uncharacterized protein.	Armadillo.	0.414
AND_006682	AND_004958	W5JFJ3	W5JJ62	Uncharacterized protein.	Uncharacterized protein.	0.414
AND_006682	AND_007538	W5JFJ3	W5JD52	Uncharacterized protein.	Actin binding protein.	0.597
AND_006682	AND_009080	W5JFJ3	W5J5P8	Uncharacterized protein.	Cadherin.	0.431