18 items (Anopheles darlingi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AND_007504	Chromatin complexes subunit BAP18. (203 aa)
	AND_000396	Helicase. (1034 aa)
	AND_001026	Transcriptional adapter. (522 aa)
	AND_001274	Uncharacterized protein. (2771 aa)
	AND_000861	Uncharacterized protein. (547 aa)
	AND_002613	Myb_DNA-bind_7 domain-containing protein. (1177 aa)
	AND_002909	E1a binding protein P400. (1411 aa)
	AND_002957	SANT domain-containing protein. (678 aa)
	AND_003787	SANT domain-containing protein. (1104 aa)
	AND_002353	Mesoderm induction early response protein 1. (357 aa)
	AND_004580	Pre-mRNA-splicing factor cef-1. (934 aa)
	AND_004904	M-phase phosphoprotein 11. (734 aa)
	AND_004775	REST corepressor. (626 aa)
	AND_005010	Myb. (793 aa)
	AND_008687	Uncharacterized protein. (1140 aa)
	AND_007548	Myb-like domain-containing protein. (1687 aa)
	AND_008995	Uncharacterized protein. (1478 aa)
	AND_010578	Metastasis-associated protein MTA. (945 aa)

Your Current Organism:

Anopheles darlingi

NCBI taxonomy Id: 43151
Other names: A. darlingi, American malaria mosquito, Anopheles paulistensis, Nyssorhynchus darlingi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AND_000396	AND_002909	W5JX29	W5JPT9	Helicase.	E1a binding protein P400.	0.666
AND_000396	AND_002957	W5JX29	W5JPP2	Helicase.	SANT domain-containing protein.	0.406
AND_000396	AND_004775	W5JX29	W5JJN4	Helicase.	REST corepressor.	0.707
AND_000396	AND_008995	W5JX29	W5J7R2	Helicase.	Uncharacterized protein.	0.698
AND_000396	AND_010578	W5JX29	W5J4W5	Helicase.	Metastasis-associated protein MTA.	0.693
AND_000861	AND_001026	W5JVG4	W5JW43	Uncharacterized protein.	Transcriptional adapter.	0.806
AND_000861	AND_004904	W5JVG4	W5JKI5	Uncharacterized protein.	M-phase phosphoprotein 11.	0.475
AND_000861	AND_007548	W5JVG4	W5J8L7	Uncharacterized protein.	Myb-like domain-containing protein.	0.614
AND_001026	AND_000861	W5JW43	W5JVG4	Transcriptional adapter.	Uncharacterized protein.	0.806
AND_001026	AND_002957	W5JW43	W5JPP2	Transcriptional adapter.	SANT domain-containing protein.	0.919
AND_001026	AND_004904	W5JW43	W5JKI5	Transcriptional adapter.	M-phase phosphoprotein 11.	0.806
AND_002353	AND_004580	W5JNC8	W5JLA4	Mesoderm induction early response protein 1.	Pre-mRNA-splicing factor cef-1.	0.468
AND_002613	AND_008687	W5JS78	W5JA82	Myb_DNA-bind_7 domain-containing protein.	Uncharacterized protein.	0.769
AND_002909	AND_000396	W5JPT9	W5JX29	E1a binding protein P400.	Helicase.	0.666
AND_002909	AND_004775	W5JPT9	W5JJN4	E1a binding protein P400.	REST corepressor.	0.674
AND_002909	AND_008995	W5JPT9	W5J7R2	E1a binding protein P400.	Uncharacterized protein.	0.431
AND_002909	AND_010578	W5JPT9	W5J4W5	E1a binding protein P400.	Metastasis-associated protein MTA.	0.675
AND_002957	AND_000396	W5JPP2	W5JX29	SANT domain-containing protein.	Helicase.	0.406
AND_002957	AND_001026	W5JPP2	W5JW43	SANT domain-containing protein.	Transcriptional adapter.	0.919
AND_002957	AND_004775	W5JPP2	W5JJN4	SANT domain-containing protein.	REST corepressor.	0.472