(24 nodes) Ubiquitin homologues network (Anopheles darlingi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AND_006251	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (489 aa)
	AND_003721	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (132 aa)
	AND_003436	Small ubiquitin-related modifier. (101 aa)
	AND_003105	Ubiquitin-like domain-containing protein. (1492 aa)
	AND_001977	Uv excision repair protein rad23. (395 aa)
	AND_002178	Spliceosome associated protein. (830 aa)
	AND_000082	Ubiquitin-like domain-containing protein. (1266 aa)
	AND_003820	Uncharacterized protein. (1703 aa)
	AND_004373	Tubulin-specific chaperone e. (501 aa)
	AND_003138	Uncharacterized protein. (637 aa)
	AND_004141	Uncharacterized protein; Belongs to the peptidase C19 family. (855 aa)
	AND_006534	Ubiquitin-5E. (154 aa)
	AND_007582	Ubiquitin conjugating enzyme 7 interacting protein. (1975 aa)
	AND_006536	Ubiquitin. (78 aa)
	AND_006535	Ubiquitin. (153 aa)
	AND_007001	Ubiquilin 1,2. (539 aa)
	AND_009123	Polyubiquitin. (81 aa)
	AND_009204	Ubiquitin. (77 aa)
	AND_009743	Elongin b. (116 aa)
	AND_009492	Ubiquitin-like domain-containing protein. (418 aa)
	AND_010385	Ubiquitin-like domain-containing protein. (418 aa)
	AND_009366	Uncharacterized protein. (323 aa)
	AND_010563	Ubiquitin-like domain-containing protein. (600 aa)
	AND_006215	Ubiquitin/60S ribosomal protein L40 fusion. (128 aa)

Your Current Organism:

Anopheles darlingi

NCBI taxonomy Id: 43151
Other names: A. darlingi, American malaria mosquito, Anopheles paulistensis, Nyssorhynchus darlingi

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AND_001977	AND_003105	W5JSF7	W5JQE3	Uv excision repair protein rad23.	Ubiquitin-like domain-containing protein.	0.673
AND_001977	AND_003138	W5JSF7	W5JL48	Uv excision repair protein rad23.	Uncharacterized protein.	0.754
AND_001977	AND_003436	W5JSF7	W5JPW7	Uv excision repair protein rad23.	Small ubiquitin-related modifier.	0.910
AND_001977	AND_003721	W5JSF7	W5JP44	Uv excision repair protein rad23.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.840
AND_001977	AND_003820	W5JSF7	W5JNI4	Uv excision repair protein rad23.	Uncharacterized protein.	0.986
AND_001977	AND_004141	W5JSF7	W5JI98	Uv excision repair protein rad23.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.879
AND_001977	AND_006215	W5JSF7	B6DDR1	Uv excision repair protein rad23.	Ubiquitin/60S ribosomal protein L40 fusion.	0.978
AND_001977	AND_006251	W5JSF7	W5JCJ4	Uv excision repair protein rad23.	E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.	0.841
AND_001977	AND_006534	W5JSF7	W5JEN8	Uv excision repair protein rad23.	Ubiquitin-5E.	0.992
AND_001977	AND_006535	W5JSF7	W5JBG3	Uv excision repair protein rad23.	Ubiquitin.	0.950
AND_001977	AND_006536	W5JSF7	W5JCI8	Uv excision repair protein rad23.	Ubiquitin.	0.915
AND_001977	AND_007001	W5JSF7	W5JA64	Uv excision repair protein rad23.	Ubiquilin 1,2.	0.965
AND_001977	AND_007582	W5JSF7	W5JD78	Uv excision repair protein rad23.	Ubiquitin conjugating enzyme 7 interacting protein.	0.755
AND_001977	AND_009123	W5JSF7	W5J935	Uv excision repair protein rad23.	Polyubiquitin.	0.665
AND_001977	AND_009204	W5JSF7	W5J8K3	Uv excision repair protein rad23.	Ubiquitin.	0.978
AND_001977	AND_009366	W5JSF7	W5J3V6	Uv excision repair protein rad23.	Uncharacterized protein.	0.902
AND_001977	AND_009743	W5JSF7	W5J756	Uv excision repair protein rad23.	Elongin b.	0.691
AND_003105	AND_001977	W5JQE3	W5JSF7	Ubiquitin-like domain-containing protein.	Uv excision repair protein rad23.	0.673
AND_003105	AND_003820	W5JQE3	W5JNI4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.839
AND_003105	AND_006534	W5JQE3	W5JEN8	Ubiquitin-like domain-containing protein.	Ubiquitin-5E.	0.825