9 items (Anopheles darlingi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AND_002238	JmjC domain-containing protein. (1452 aa)
	AND_009986	F-box and leucine-rich repeat protein 11. (1422 aa)
	AND_009024	Uncharacterized protein. (933 aa)
	AND_009164	JmjC domain-containing histone demethylation protein 3C. (446 aa)
	AND_007052	Pla2g4b. (320 aa)
	AND_006723	Histone demethylase UTY. (1401 aa)
	AND_005900	JmjC domain-containing protein. (416 aa)
	AND_004659	Jumonji/ARID domain-containing protein 1A. (1600 aa)
	AND_003069	Phosphatidylserine receptor. (402 aa)

Your Current Organism:

Anopheles darlingi

NCBI taxonomy Id: 43151
Other names: A. darlingi, American malaria mosquito, Anopheles paulistensis, Nyssorhynchus darlingi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AND_002238	AND_003069	W5JSU3	W5JPC5	JmjC domain-containing protein.	Phosphatidylserine receptor.	0.479
AND_002238	AND_005900	W5JSU3	W5JEF0	JmjC domain-containing protein.	JmjC domain-containing protein.	0.481
AND_002238	AND_009986	W5JSU3	W5J3G7	JmjC domain-containing protein.	F-box and leucine-rich repeat protein 11.	0.814
AND_003069	AND_002238	W5JPC5	W5JSU3	Phosphatidylserine receptor.	JmjC domain-containing protein.	0.479
AND_003069	AND_004659	W5JPC5	W5JJY5	Phosphatidylserine receptor.	Jumonji/ARID domain-containing protein 1A.	0.468
AND_003069	AND_005900	W5JPC5	W5JEF0	Phosphatidylserine receptor.	JmjC domain-containing protein.	0.491
AND_004659	AND_003069	W5JJY5	W5JPC5	Jumonji/ARID domain-containing protein 1A.	Phosphatidylserine receptor.	0.468
AND_004659	AND_005900	W5JJY5	W5JEF0	Jumonji/ARID domain-containing protein 1A.	JmjC domain-containing protein.	0.468
AND_004659	AND_009024	W5JJY5	W5J5W7	Jumonji/ARID domain-containing protein 1A.	Uncharacterized protein.	0.448
AND_004659	AND_009164	W5JJY5	W5J8X9	Jumonji/ARID domain-containing protein 1A.	JmjC domain-containing histone demethylation protein 3C.	0.448
AND_004659	AND_009986	W5JJY5	W5J3G7	Jumonji/ARID domain-containing protein 1A.	F-box and leucine-rich repeat protein 11.	0.832
AND_005900	AND_002238	W5JEF0	W5JSU3	JmjC domain-containing protein.	JmjC domain-containing protein.	0.481
AND_005900	AND_003069	W5JEF0	W5JPC5	JmjC domain-containing protein.	Phosphatidylserine receptor.	0.491
AND_005900	AND_004659	W5JEF0	W5JJY5	JmjC domain-containing protein.	Jumonji/ARID domain-containing protein 1A.	0.468
AND_005900	AND_007052	W5JEF0	W5JA12	JmjC domain-containing protein.	Pla2g4b.	0.425
AND_005900	AND_009986	W5JEF0	W5J3G7	JmjC domain-containing protein.	F-box and leucine-rich repeat protein 11.	0.641
AND_006723	AND_009986	W5JAX5	W5J3G7	Histone demethylase UTY.	F-box and leucine-rich repeat protein 11.	0.409
AND_007052	AND_005900	W5JA12	W5JEF0	Pla2g4b.	JmjC domain-containing protein.	0.425
AND_009024	AND_004659	W5J5W7	W5JJY5	Uncharacterized protein.	Jumonji/ARID domain-containing protein 1A.	0.448
AND_009024	AND_009986	W5J5W7	W5J3G7	Uncharacterized protein.	F-box and leucine-rich repeat protein 11.	0.678