(6 nodes) Mixed, incl. Enzymatic degradation of dopamine by COMT, and GDP-L-fucose synthase activity network (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K3WCQ8_GLOUD	Uncharacterized protein. (222 aa)
	K3WHI9_GLOUD	Uncharacterized protein. (446 aa)
	K3WYI1_GLOUD	Amine oxidase; Belongs to the copper/topaquinone oxidase family. (97 aa)
	K3WZP1_GLOUD	Uncharacterized protein. (183 aa)
	K3X7V3_GLOUD	Uncharacterized protein. (118 aa)
	K3XDB5_GLOUD	Uncharacterized protein. (350 aa)

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

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same PNG format, but at higher resolution

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3WCQ8_GLOUD	K3WHI9_GLOUD	K3WCQ8	K3WHI9	Uncharacterized protein.	Uncharacterized protein.	0.428
K3WCQ8_GLOUD	K3WYI1_GLOUD	K3WCQ8	K3WYI1	Uncharacterized protein.	Amine oxidase; Belongs to the copper/topaquinone oxidase family.	0.558
K3WCQ8_GLOUD	K3WZP1_GLOUD	K3WCQ8	K3WZP1	Uncharacterized protein.	Uncharacterized protein.	0.467
K3WCQ8_GLOUD	K3XDB5_GLOUD	K3WCQ8	K3XDB5	Uncharacterized protein.	Uncharacterized protein.	0.495
K3WHI9_GLOUD	K3WCQ8_GLOUD	K3WHI9	K3WCQ8	Uncharacterized protein.	Uncharacterized protein.	0.428
K3WHI9_GLOUD	K3WYI1_GLOUD	K3WHI9	K3WYI1	Uncharacterized protein.	Amine oxidase; Belongs to the copper/topaquinone oxidase family.	0.738
K3WHI9_GLOUD	K3X7V3_GLOUD	K3WHI9	K3X7V3	Uncharacterized protein.	Uncharacterized protein.	0.428
K3WYI1_GLOUD	K3WCQ8_GLOUD	K3WYI1	K3WCQ8	Amine oxidase; Belongs to the copper/topaquinone oxidase family.	Uncharacterized protein.	0.558
K3WYI1_GLOUD	K3WHI9_GLOUD	K3WYI1	K3WHI9	Amine oxidase; Belongs to the copper/topaquinone oxidase family.	Uncharacterized protein.	0.738
K3WYI1_GLOUD	K3X7V3_GLOUD	K3WYI1	K3X7V3	Amine oxidase; Belongs to the copper/topaquinone oxidase family.	Uncharacterized protein.	0.558
K3WZP1_GLOUD	K3WCQ8_GLOUD	K3WZP1	K3WCQ8	Uncharacterized protein.	Uncharacterized protein.	0.467
K3WZP1_GLOUD	K3X7V3_GLOUD	K3WZP1	K3X7V3	Uncharacterized protein.	Uncharacterized protein.	0.467
K3WZP1_GLOUD	K3XDB5_GLOUD	K3WZP1	K3XDB5	Uncharacterized protein.	Uncharacterized protein.	0.881
K3X7V3_GLOUD	K3WHI9_GLOUD	K3X7V3	K3WHI9	Uncharacterized protein.	Uncharacterized protein.	0.428
K3X7V3_GLOUD	K3WYI1_GLOUD	K3X7V3	K3WYI1	Uncharacterized protein.	Amine oxidase; Belongs to the copper/topaquinone oxidase family.	0.558
K3X7V3_GLOUD	K3WZP1_GLOUD	K3X7V3	K3WZP1	Uncharacterized protein.	Uncharacterized protein.	0.467
K3X7V3_GLOUD	K3XDB5_GLOUD	K3X7V3	K3XDB5	Uncharacterized protein.	Uncharacterized protein.	0.495
K3XDB5_GLOUD	K3WCQ8_GLOUD	K3XDB5	K3WCQ8	Uncharacterized protein.	Uncharacterized protein.	0.495
K3XDB5_GLOUD	K3WZP1_GLOUD	K3XDB5	K3WZP1	Uncharacterized protein.	Uncharacterized protein.	0.881
K3XDB5_GLOUD	K3X7V3_GLOUD	K3XDB5	K3X7V3	Uncharacterized protein.	Uncharacterized protein.	0.495