(13 nodes) Zinc ion transport network (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K3W535_GLOUD	Uncharacterized protein. (383 aa)
	K3W5A9_GLOUD	Uncharacterized protein. (538 aa)
	K3W5S1_GLOUD	Uncharacterized protein. (417 aa)
	K3W9A6_GLOUD	Uncharacterized protein. (612 aa)
	K3WD58_GLOUD	Uncharacterized protein. (545 aa)
	K3WI47_GLOUD	Uncharacterized protein. (495 aa)
	K3WKJ3_GLOUD	Uncharacterized protein. (313 aa)
	K3WKJ5_GLOUD	Plastocyanin-like domain-containing protein. (505 aa)
	K3WNM1_GLOUD	Uncharacterized protein. (488 aa)
	K3WV54_GLOUD	Uncharacterized protein. (340 aa)
	K3WZX8_GLOUD	Uncharacterized protein. (327 aa)
	K3X8I3_GLOUD	Uncharacterized protein. (445 aa)
	K3XBB5_GLOUD	Uncharacterized protein. (844 aa)

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3W535_GLOUD	K3WKJ3_GLOUD	K3W535	K3WKJ3	Uncharacterized protein.	Uncharacterized protein.	0.450
K3W535_GLOUD	K3WKJ5_GLOUD	K3W535	K3WKJ5	Uncharacterized protein.	Plastocyanin-like domain-containing protein.	0.435
K3W5A9_GLOUD	K3XBB5_GLOUD	K3W5A9	K3XBB5	Uncharacterized protein.	Uncharacterized protein.	0.463
K3W5S1_GLOUD	K3XBB5_GLOUD	K3W5S1	K3XBB5	Uncharacterized protein.	Uncharacterized protein.	0.429
K3WKJ3_GLOUD	K3W535_GLOUD	K3WKJ3	K3W535	Uncharacterized protein.	Uncharacterized protein.	0.450
K3WKJ5_GLOUD	K3W535_GLOUD	K3WKJ5	K3W535	Plastocyanin-like domain-containing protein.	Uncharacterized protein.	0.435
K3X8I3_GLOUD	K3XBB5_GLOUD	K3X8I3	K3XBB5	Uncharacterized protein.	Uncharacterized protein.	0.501
K3XBB5_GLOUD	K3W5A9_GLOUD	K3XBB5	K3W5A9	Uncharacterized protein.	Uncharacterized protein.	0.463
K3XBB5_GLOUD	K3W5S1_GLOUD	K3XBB5	K3W5S1	Uncharacterized protein.	Uncharacterized protein.	0.429
K3XBB5_GLOUD	K3X8I3_GLOUD	K3XBB5	K3X8I3	Uncharacterized protein.	Uncharacterized protein.	0.501