(12 nodes) Mixed, incl. Protein O-linked glycosylation, and Methyltransferase type 11 network (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K3W7A2_GLOUD	Methyltransf_11 domain-containing protein. (315 aa)
	K3WDJ8_GLOUD	Uncharacterized protein. (316 aa)
	K3WE23_GLOUD	Uncharacterized protein. (393 aa)
	K3WIW0_GLOUD	GOLD domain-containing protein. (272 aa)
	K3WMH6_GLOUD	Uncharacterized protein. (213 aa)
	K3WMH7_GLOUD	acidPPc domain-containing protein. (236 aa)
	K3WMT9_GLOUD	Uncharacterized protein. (518 aa)
	K3WPY4_GLOUD	CAP10 domain-containing protein. (756 aa)
	K3WSG4_GLOUD	Uncharacterized protein. (597 aa)
	K3X521_GLOUD	Methyltransf_11 domain-containing protein. (206 aa)
	K3X8V2_GLOUD	Uncharacterized protein. (328 aa)
	K3XAA1_GLOUD	CEP76-C2 domain-containing protein. (778 aa)

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3WIW0_GLOUD	K3XAA1_GLOUD	K3WIW0	K3XAA1	GOLD domain-containing protein.	CEP76-C2 domain-containing protein.	0.412
K3WMH6_GLOUD	K3WMH7_GLOUD	K3WMH6	K3WMH7	Uncharacterized protein.	acidPPc domain-containing protein.	0.699
K3WMH7_GLOUD	K3WMH6_GLOUD	K3WMH7	K3WMH6	acidPPc domain-containing protein.	Uncharacterized protein.	0.699
K3WSG4_GLOUD	K3X8V2_GLOUD	K3WSG4	K3X8V2	Uncharacterized protein.	Uncharacterized protein.	0.741
K3X8V2_GLOUD	K3WSG4_GLOUD	K3X8V2	K3WSG4	Uncharacterized protein.	Uncharacterized protein.	0.741
K3X8V2_GLOUD	K3XAA1_GLOUD	K3X8V2	K3XAA1	Uncharacterized protein.	CEP76-C2 domain-containing protein.	0.518
K3XAA1_GLOUD	K3WIW0_GLOUD	K3XAA1	K3WIW0	CEP76-C2 domain-containing protein.	GOLD domain-containing protein.	0.412
K3XAA1_GLOUD	K3X8V2_GLOUD	K3XAA1	K3X8V2	CEP76-C2 domain-containing protein.	Uncharacterized protein.	0.518