(5 nodes) Notch signaling pathway network (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K3WAV3_GLOUD	Uncharacterized protein. (525 aa)
	K3WL66_GLOUD	Uncharacterized protein. (573 aa)
	K3X4S5_GLOUD	Uncharacterized protein. (246 aa)
	K3XAK7_GLOUD	Ncstrn_small domain-containing protein. (737 aa)
	K3XB54_GLOUD	Uncharacterized protein. (127 aa)

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3WAV3_GLOUD	K3X4S5_GLOUD	K3WAV3	K3X4S5	Uncharacterized protein.	Uncharacterized protein.	0.923
K3WAV3_GLOUD	K3XAK7_GLOUD	K3WAV3	K3XAK7	Uncharacterized protein.	Ncstrn_small domain-containing protein.	0.947
K3WAV3_GLOUD	K3XB54_GLOUD	K3WAV3	K3XB54	Uncharacterized protein.	Uncharacterized protein.	0.921
K3WL66_GLOUD	K3X4S5_GLOUD	K3WL66	K3X4S5	Uncharacterized protein.	Uncharacterized protein.	0.937
K3WL66_GLOUD	K3XAK7_GLOUD	K3WL66	K3XAK7	Uncharacterized protein.	Ncstrn_small domain-containing protein.	0.951
K3WL66_GLOUD	K3XB54_GLOUD	K3WL66	K3XB54	Uncharacterized protein.	Uncharacterized protein.	0.921
K3X4S5_GLOUD	K3WAV3_GLOUD	K3X4S5	K3WAV3	Uncharacterized protein.	Uncharacterized protein.	0.923
K3X4S5_GLOUD	K3WL66_GLOUD	K3X4S5	K3WL66	Uncharacterized protein.	Uncharacterized protein.	0.937
K3X4S5_GLOUD	K3XAK7_GLOUD	K3X4S5	K3XAK7	Uncharacterized protein.	Ncstrn_small domain-containing protein.	0.985
K3X4S5_GLOUD	K3XB54_GLOUD	K3X4S5	K3XB54	Uncharacterized protein.	Uncharacterized protein.	0.983
K3XAK7_GLOUD	K3WAV3_GLOUD	K3XAK7	K3WAV3	Ncstrn_small domain-containing protein.	Uncharacterized protein.	0.947
K3XAK7_GLOUD	K3WL66_GLOUD	K3XAK7	K3WL66	Ncstrn_small domain-containing protein.	Uncharacterized protein.	0.951
K3XAK7_GLOUD	K3X4S5_GLOUD	K3XAK7	K3X4S5	Ncstrn_small domain-containing protein.	Uncharacterized protein.	0.985
K3XAK7_GLOUD	K3XB54_GLOUD	K3XAK7	K3XB54	Ncstrn_small domain-containing protein.	Uncharacterized protein.	0.991
K3XB54_GLOUD	K3WAV3_GLOUD	K3XB54	K3WAV3	Uncharacterized protein.	Uncharacterized protein.	0.921
K3XB54_GLOUD	K3WL66_GLOUD	K3XB54	K3WL66	Uncharacterized protein.	Uncharacterized protein.	0.921
K3XB54_GLOUD	K3X4S5_GLOUD	K3XB54	K3X4S5	Uncharacterized protein.	Uncharacterized protein.	0.983
K3XB54_GLOUD	K3XAK7_GLOUD	K3XB54	K3XAK7	Uncharacterized protein.	Ncstrn_small domain-containing protein.	0.991