(11 nodes) Mixed, incl. VCP-NPL4-UFD1 AAA ATPase complex, and Ovarian tumor domain proteases network (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K3W8K2_GLOUD	Uncharacterized protein. (1585 aa)
	K3WD15_GLOUD	Uncharacterized protein. (124 aa)
	K3WDU6_GLOUD	Uncharacterized protein. (1175 aa)
	K3WG58_GLOUD	ATPase_AAA_core domain-containing protein. (349 aa)
	K3WN05_GLOUD	UBX domain-containing protein. (423 aa)
	K3WUF5_GLOUD	Uncharacterized protein. (348 aa)
	K3WV44_GLOUD	Uncharacterized protein. (532 aa)
	K3WWI9_GLOUD	UBX domain-containing protein. (521 aa)
	K3WWM9_GLOUD	Uncharacterized protein. (777 aa)
	K3WYZ6_GLOUD	Uncharacterized protein. (427 aa)
	K3X230_GLOUD	OTU domain-containing protein. (296 aa)

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3W8K2_GLOUD	K3WD15_GLOUD	K3W8K2	K3WD15	Uncharacterized protein.	Uncharacterized protein.	0.769
K3W8K2_GLOUD	K3WDU6_GLOUD	K3W8K2	K3WDU6	Uncharacterized protein.	Uncharacterized protein.	0.638
K3W8K2_GLOUD	K3WG58_GLOUD	K3W8K2	K3WG58	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.638
K3W8K2_GLOUD	K3WUF5_GLOUD	K3W8K2	K3WUF5	Uncharacterized protein.	Uncharacterized protein.	0.769
K3W8K2_GLOUD	K3WV44_GLOUD	K3W8K2	K3WV44	Uncharacterized protein.	Uncharacterized protein.	0.920
K3W8K2_GLOUD	K3WWI9_GLOUD	K3W8K2	K3WWI9	Uncharacterized protein.	UBX domain-containing protein.	0.769
K3W8K2_GLOUD	K3WWM9_GLOUD	K3W8K2	K3WWM9	Uncharacterized protein.	Uncharacterized protein.	0.549
K3W8K2_GLOUD	K3WYZ6_GLOUD	K3W8K2	K3WYZ6	Uncharacterized protein.	Uncharacterized protein.	0.927
K3W8K2_GLOUD	K3X230_GLOUD	K3W8K2	K3X230	Uncharacterized protein.	OTU domain-containing protein.	0.926
K3WD15_GLOUD	K3W8K2_GLOUD	K3WD15	K3W8K2	Uncharacterized protein.	Uncharacterized protein.	0.769
K3WD15_GLOUD	K3WDU6_GLOUD	K3WD15	K3WDU6	Uncharacterized protein.	Uncharacterized protein.	0.790
K3WD15_GLOUD	K3WG58_GLOUD	K3WD15	K3WG58	Uncharacterized protein.	ATPase_AAA_core domain-containing protein.	0.790
K3WD15_GLOUD	K3WN05_GLOUD	K3WD15	K3WN05	Uncharacterized protein.	UBX domain-containing protein.	0.940
K3WD15_GLOUD	K3WV44_GLOUD	K3WD15	K3WV44	Uncharacterized protein.	Uncharacterized protein.	0.794
K3WD15_GLOUD	K3WWI9_GLOUD	K3WD15	K3WWI9	Uncharacterized protein.	UBX domain-containing protein.	0.901
K3WD15_GLOUD	K3WWM9_GLOUD	K3WD15	K3WWM9	Uncharacterized protein.	Uncharacterized protein.	0.854
K3WD15_GLOUD	K3WYZ6_GLOUD	K3WD15	K3WYZ6	Uncharacterized protein.	Uncharacterized protein.	0.979
K3WD15_GLOUD	K3X230_GLOUD	K3WD15	K3X230	Uncharacterized protein.	OTU domain-containing protein.	0.858
K3WDU6_GLOUD	K3W8K2_GLOUD	K3WDU6	K3W8K2	Uncharacterized protein.	Uncharacterized protein.	0.638
K3WDU6_GLOUD	K3WD15_GLOUD	K3WDU6	K3WD15	Uncharacterized protein.	Uncharacterized protein.	0.790