(5 nodes) Mixed, incl. Derlin, and Protein OS-9-like network (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K3W7V3_GLOUD	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (255 aa)
	K3WA16_GLOUD	PRKCSH domain-containing protein. (505 aa)
	K3WBZ1_GLOUD	Uncharacterized protein. (715 aa)
	K3WUV6_GLOUD	Uncharacterized protein. (924 aa)
	K3X6E8_GLOUD	Uncharacterized protein. (524 aa)

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3W7V3_GLOUD	K3WA16_GLOUD	K3W7V3	K3WA16	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	PRKCSH domain-containing protein.	0.909
K3W7V3_GLOUD	K3WBZ1_GLOUD	K3W7V3	K3WBZ1	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein.	0.872
K3W7V3_GLOUD	K3WUV6_GLOUD	K3W7V3	K3WUV6	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein.	0.804
K3W7V3_GLOUD	K3X6E8_GLOUD	K3W7V3	K3X6E8	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein.	0.787
K3WA16_GLOUD	K3W7V3_GLOUD	K3WA16	K3W7V3	PRKCSH domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.909
K3WA16_GLOUD	K3WBZ1_GLOUD	K3WA16	K3WBZ1	PRKCSH domain-containing protein.	Uncharacterized protein.	0.867
K3WA16_GLOUD	K3WUV6_GLOUD	K3WA16	K3WUV6	PRKCSH domain-containing protein.	Uncharacterized protein.	0.797
K3WA16_GLOUD	K3X6E8_GLOUD	K3WA16	K3X6E8	PRKCSH domain-containing protein.	Uncharacterized protein.	0.808
K3WBZ1_GLOUD	K3W7V3_GLOUD	K3WBZ1	K3W7V3	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.872
K3WBZ1_GLOUD	K3WA16_GLOUD	K3WBZ1	K3WA16	Uncharacterized protein.	PRKCSH domain-containing protein.	0.867
K3WBZ1_GLOUD	K3WUV6_GLOUD	K3WBZ1	K3WUV6	Uncharacterized protein.	Uncharacterized protein.	0.778
K3WBZ1_GLOUD	K3X6E8_GLOUD	K3WBZ1	K3X6E8	Uncharacterized protein.	Uncharacterized protein.	0.768
K3WUV6_GLOUD	K3W7V3_GLOUD	K3WUV6	K3W7V3	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.804
K3WUV6_GLOUD	K3WA16_GLOUD	K3WUV6	K3WA16	Uncharacterized protein.	PRKCSH domain-containing protein.	0.797
K3WUV6_GLOUD	K3WBZ1_GLOUD	K3WUV6	K3WBZ1	Uncharacterized protein.	Uncharacterized protein.	0.778
K3WUV6_GLOUD	K3X6E8_GLOUD	K3WUV6	K3X6E8	Uncharacterized protein.	Uncharacterized protein.	0.667
K3X6E8_GLOUD	K3W7V3_GLOUD	K3X6E8	K3W7V3	Uncharacterized protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.787
K3X6E8_GLOUD	K3WA16_GLOUD	K3X6E8	K3WA16	Uncharacterized protein.	PRKCSH domain-containing protein.	0.808
K3X6E8_GLOUD	K3WBZ1_GLOUD	K3X6E8	K3WBZ1	Uncharacterized protein.	Uncharacterized protein.	0.768
K3X6E8_GLOUD	K3WUV6_GLOUD	K3X6E8	K3WUV6	Uncharacterized protein.	Uncharacterized protein.	0.667