(22 nodes) RAF activation, and Cyclin A/B1/B2 associated events during G2/M transition network (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K3W7S1_GLOUD	Uncharacterized protein. (622 aa)
	K3W898_GLOUD	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated. (340 aa)
	K3WE09_GLOUD	PH domain-containing protein. (714 aa)
	K3WEG0_GLOUD	Uncharacterized protein. (184 aa)
	K3WFG1_GLOUD	Serine/threonine-protein phosphatase. (315 aa)
	K3WJR6_GLOUD	PDZ domain-containing protein. (1302 aa)
	K3WPS6_GLOUD	Uncharacterized protein. (922 aa)
	K3WPY7_GLOUD	Uncharacterized protein. (602 aa)
	K3WUZ8_GLOUD	Metallophos domain-containing protein. (268 aa)
	K3WW84_GLOUD	Uncharacterized protein. (399 aa)
	K3WXG7_GLOUD	Uncharacterized protein. (711 aa)
	K3WZT2_GLOUD	Serine/threonine-protein phosphatase. (311 aa)
	K3X499_GLOUD	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (461 aa)
	K3X4H1_GLOUD	Uncharacterized protein. (510 aa)
	K3X4R6_GLOUD	Uncharacterized protein. (707 aa)
	K3X5R1_GLOUD	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (440 aa)
	K3X6N4_GLOUD	Uncharacterized protein. (578 aa)
	K3X824_GLOUD	Serine/threonine-protein phosphatase. (787 aa)
	K3X8B6_GLOUD	Serine/threonine-protein phosphatase. (319 aa)
	K3X9P2_GLOUD	N-acetyltransferase domain-containing protein. (490 aa)
	K3X9X6_GLOUD	Uncharacterized protein. (521 aa)
	K3XB75_GLOUD	Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (475 aa)

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3W7S1_GLOUD	K3W898_GLOUD	K3W7S1	K3W898	Uncharacterized protein.	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.	0.679
K3W7S1_GLOUD	K3WEG0_GLOUD	K3W7S1	K3WEG0	Uncharacterized protein.	Uncharacterized protein.	0.538
K3W7S1_GLOUD	K3WFG1_GLOUD	K3W7S1	K3WFG1	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.753
K3W7S1_GLOUD	K3WJR6_GLOUD	K3W7S1	K3WJR6	Uncharacterized protein.	PDZ domain-containing protein.	0.800
K3W7S1_GLOUD	K3WPS6_GLOUD	K3W7S1	K3WPS6	Uncharacterized protein.	Uncharacterized protein.	0.800
K3W7S1_GLOUD	K3WPY7_GLOUD	K3W7S1	K3WPY7	Uncharacterized protein.	Uncharacterized protein.	0.866
K3W7S1_GLOUD	K3WUZ8_GLOUD	K3W7S1	K3WUZ8	Uncharacterized protein.	Metallophos domain-containing protein.	0.820
K3W7S1_GLOUD	K3WW84_GLOUD	K3W7S1	K3WW84	Uncharacterized protein.	Uncharacterized protein.	0.586
K3W7S1_GLOUD	K3WZT2_GLOUD	K3W7S1	K3WZT2	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.820
K3W7S1_GLOUD	K3X499_GLOUD	K3W7S1	K3X499	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.	0.878
K3W7S1_GLOUD	K3X4H1_GLOUD	K3W7S1	K3X4H1	Uncharacterized protein.	Uncharacterized protein.	0.800
K3W7S1_GLOUD	K3X4R6_GLOUD	K3W7S1	K3X4R6	Uncharacterized protein.	Uncharacterized protein.	0.538
K3W7S1_GLOUD	K3X6N4_GLOUD	K3W7S1	K3X6N4	Uncharacterized protein.	Uncharacterized protein.	0.800
K3W7S1_GLOUD	K3X824_GLOUD	K3W7S1	K3X824	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.737
K3W7S1_GLOUD	K3X8B6_GLOUD	K3W7S1	K3X8B6	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.820
K3W7S1_GLOUD	K3X9X6_GLOUD	K3W7S1	K3X9X6	Uncharacterized protein.	Uncharacterized protein.	0.753
K3W898_GLOUD	K3W7S1_GLOUD	K3W898	K3W7S1	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.	Uncharacterized protein.	0.679
K3W898_GLOUD	K3WE09_GLOUD	K3W898	K3WE09	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.	PH domain-containing protein.	0.679
K3W898_GLOUD	K3WEG0_GLOUD	K3W898	K3WEG0	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.	Uncharacterized protein.	0.590
K3W898_GLOUD	K3WJR6_GLOUD	K3W898	K3WJR6	Protein phosphatase methylesterase 1; Demethylates proteins that have been reversibly carboxymethylated.	PDZ domain-containing protein.	0.855