(38 nodes) Small-subunit processome, and Regulation of transcription by RNA polymerase I network (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K3W5I7_GLOUD	Uncharacterized protein. (1041 aa)
	K3W6F5_GLOUD	Uncharacterized protein. (914 aa)
	K3W8E3_GLOUD	Utp12 domain-containing protein. (123 aa)
	K3W9R6_GLOUD	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
	K3WAT9_GLOUD	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (250 aa)
	K3WBL1_GLOUD	Uncharacterized protein. (1160 aa)
	K3WD44_GLOUD	RRP7 domain-containing protein. (260 aa)
	K3WE85_GLOUD	CBF domain-containing protein. (593 aa)
	K3WH81_GLOUD	WD_REPEATS_REGION domain-containing protein. (641 aa)
	K3WHJ3_GLOUD	WD_REPEATS_REGION domain-containing protein. (555 aa)
	K3WHM9_GLOUD	Uncharacterized protein. (468 aa)
	K3WHQ1_GLOUD	Uncharacterized protein. (488 aa)
	K3WI00_GLOUD	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (396 aa)
	K3WJW5_GLOUD	Nop domain-containing protein. (499 aa)
	K3WK67_GLOUD	Brix domain-containing protein. (293 aa)
	K3WKI0_GLOUD	Uncharacterized protein. (373 aa)
	K3WQG2_GLOUD	WD_REPEATS_REGION domain-containing protein. (614 aa)
	K3WRP8_GLOUD	WD_REPEATS_REGION domain-containing protein. (519 aa)
	K3WRT7_GLOUD	Uncharacterized protein. (456 aa)
	K3WS75_GLOUD	Uncharacterized protein. (380 aa)
	K3WST8_GLOUD	Sas10 domain-containing protein. (505 aa)
	K3WSU8_GLOUD	Nop domain-containing protein. (503 aa)
	K3WTZ3_GLOUD	Bms1-type G domain-containing protein. (1193 aa)
	K3WUS7_GLOUD	WD_REPEATS_REGION domain-containing protein. (446 aa)
	K3WW06_GLOUD	Fcf2 domain-containing protein. (469 aa)
	K3WWJ4_GLOUD	Uncharacterized protein. (1987 aa)
	K3WYW3_GLOUD	PINc domain-containing protein. (182 aa)
	K3WZF3_GLOUD	Uncharacterized protein. (319 aa)
	K3X1I0_GLOUD	Uncharacterized protein. (350 aa)
	K3X238_GLOUD	WD_REPEATS_REGION domain-containing protein. (730 aa)
	K3X601_GLOUD	WD_REPEATS_REGION domain-containing protein. (725 aa)
	K3X6C9_GLOUD	Uncharacterized protein. (220 aa)
	K3X8R7_GLOUD	WD_REPEATS_REGION domain-containing protein. (474 aa)
	K3X9M4_GLOUD	Uncharacterized protein. (674 aa)
	K3X9Y8_GLOUD	Uncharacterized protein. (317 aa)
	K3XAW6_GLOUD	BP28CT domain-containing protein. (2167 aa)
	K3XB78_GLOUD	S4 RNA-binding domain-containing protein. (183 aa)
	K3XCC4_GLOUD	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1096 aa)

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3W5I7_GLOUD	K3W6F5_GLOUD	K3W5I7	K3W6F5	Uncharacterized protein.	Uncharacterized protein.	0.991
K3W5I7_GLOUD	K3W8E3_GLOUD	K3W5I7	K3W8E3	Uncharacterized protein.	Utp12 domain-containing protein.	0.999
K3W5I7_GLOUD	K3W9R6_GLOUD	K3W5I7	K3W9R6	Uncharacterized protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.976
K3W5I7_GLOUD	K3WAT9_GLOUD	K3W5I7	K3WAT9	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.990
K3W5I7_GLOUD	K3WBL1_GLOUD	K3W5I7	K3WBL1	Uncharacterized protein.	Uncharacterized protein.	0.999
K3W5I7_GLOUD	K3WD44_GLOUD	K3W5I7	K3WD44	Uncharacterized protein.	RRP7 domain-containing protein.	0.996
K3W5I7_GLOUD	K3WE85_GLOUD	K3W5I7	K3WE85	Uncharacterized protein.	CBF domain-containing protein.	0.996
K3W5I7_GLOUD	K3WH81_GLOUD	K3W5I7	K3WH81	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.998
K3W5I7_GLOUD	K3WHJ3_GLOUD	K3W5I7	K3WHJ3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.998
K3W5I7_GLOUD	K3WHM9_GLOUD	K3W5I7	K3WHM9	Uncharacterized protein.	Uncharacterized protein.	0.999
K3W5I7_GLOUD	K3WHQ1_GLOUD	K3W5I7	K3WHQ1	Uncharacterized protein.	Uncharacterized protein.	0.997
K3W5I7_GLOUD	K3WI00_GLOUD	K3W5I7	K3WI00	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.997
K3W5I7_GLOUD	K3WJW5_GLOUD	K3W5I7	K3WJW5	Uncharacterized protein.	Nop domain-containing protein.	0.997
K3W5I7_GLOUD	K3WK67_GLOUD	K3W5I7	K3WK67	Uncharacterized protein.	Brix domain-containing protein.	0.997
K3W5I7_GLOUD	K3WKI0_GLOUD	K3W5I7	K3WKI0	Uncharacterized protein.	Uncharacterized protein.	0.992
K3W5I7_GLOUD	K3WQG2_GLOUD	K3W5I7	K3WQG2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
K3W5I7_GLOUD	K3WRP8_GLOUD	K3W5I7	K3WRP8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
K3W5I7_GLOUD	K3WRT7_GLOUD	K3W5I7	K3WRT7	Uncharacterized protein.	Uncharacterized protein.	0.994
K3W5I7_GLOUD	K3WS75_GLOUD	K3W5I7	K3WS75	Uncharacterized protein.	Uncharacterized protein.	0.997
K3W5I7_GLOUD	K3WST8_GLOUD	K3W5I7	K3WST8	Uncharacterized protein.	Sas10 domain-containing protein.	0.997