(46 nodes) Negative regulation of signal transduction network (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K3X8H1_GLOUD	BZIP domain-containing protein. (534 aa)
	K3W516_GLOUD	Uncharacterized protein. (653 aa)
	K3W550_GLOUD	Uncharacterized protein. (690 aa)
	K3W6J1_GLOUD	Uncharacterized protein. (236 aa)
	K3W8A0_GLOUD	ACT_7 domain-containing protein. (366 aa)
	K3W8N0_GLOUD	Uncharacterized protein. (3147 aa)
	K3W967_GLOUD	FYVE-type domain-containing protein. (522 aa)
	K3WA56_GLOUD	Uncharacterized protein. (108 aa)
	K3WAI6_GLOUD	FYVE-type domain-containing protein. (698 aa)
	K3WAI8_GLOUD	FYVE-type domain-containing protein. (713 aa)
	K3WAK4_GLOUD	FYVE-type domain-containing protein. (517 aa)
	K3WCL8_GLOUD	Uncharacterized protein. (433 aa)
	K3WDJ8_GLOUD	Uncharacterized protein. (316 aa)
	K3WEV0_GLOUD	FYVE-type domain-containing protein. (239 aa)
	K3WFN9_GLOUD	WD_REPEATS_REGION domain-containing protein. (346 aa)
	K3WG24_GLOUD	Uncharacterized protein. (494 aa)
	K3WH75_GLOUD	Uncharacterized protein. (2147 aa)
	K3WI37_GLOUD	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1081 aa)
	K3WKP7_GLOUD	PPM-type phosphatase domain-containing protein. (330 aa)
	K3WL70_GLOUD	Uncharacterized protein. (713 aa)
	K3WL74_GLOUD	PPM-type phosphatase domain-containing protein. (294 aa)
	K3WQ49_GLOUD	Rap-GAP domain-containing protein. (416 aa)
	K3WQ50_GLOUD	DUF3384 domain-containing protein. (1152 aa)
	K3WQ97_GLOUD	RING-type domain-containing protein. (464 aa)
	K3WQB8_GLOUD	RING-type domain-containing protein. (267 aa)
	K3WVM6_GLOUD	WD_REPEATS_REGION domain-containing protein. (765 aa)
	K3WVU9_GLOUD	Uncharacterized protein. (3661 aa)
	K3WXC3_GLOUD	Uncharacterized protein. (667 aa)
	K3WYA2_GLOUD	Uncharacterized protein. (610 aa)
	K3X0A3_GLOUD	Uncharacterized protein. (143 aa)
	K3X265_GLOUD	Uncharacterized protein. (587 aa)
	K3X2C1_GLOUD	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (399 aa)
	K3X4P2_GLOUD	Uncharacterized protein. (340 aa)
	K3X539_GLOUD	Uncharacterized protein. (739 aa)
	K3X6I3_GLOUD	Uncharacterized protein. (803 aa)
	K3X712_GLOUD	Uncharacterized protein. (668 aa)
	K3X861_GLOUD	FYVE-type domain-containing protein. (336 aa)
	K3X9C5_GLOUD	Uncharacterized protein. (395 aa)
	K3X9F0_GLOUD	Protein kinase domain-containing protein. (785 aa)
	K3X9Q6_GLOUD	Uncharacterized protein. (660 aa)
	K3X9R0_GLOUD	Uncharacterized protein. (248 aa)
	K3X9V3_GLOUD	FYVE-type domain-containing protein. (440 aa)
	K3XBN7_GLOUD	Uncharacterized protein. (1340 aa)
	K3XBW6_GLOUD	Protein kinase domain-containing protein. (411 aa)
	K3XCI4_GLOUD	Protein kinase domain-containing protein. (281 aa)
	K3XCW8_GLOUD	Protein kinase domain-containing protein. (399 aa)

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3W8A0_GLOUD	K3WCL8_GLOUD	K3W8A0	K3WCL8	ACT_7 domain-containing protein.	Uncharacterized protein.	0.511
K3W8A0_GLOUD	K3WVU9_GLOUD	K3W8A0	K3WVU9	ACT_7 domain-containing protein.	Uncharacterized protein.	0.508
K3W8A0_GLOUD	K3X712_GLOUD	K3W8A0	K3X712	ACT_7 domain-containing protein.	Uncharacterized protein.	0.590
K3WCL8_GLOUD	K3W8A0_GLOUD	K3WCL8	K3W8A0	Uncharacterized protein.	ACT_7 domain-containing protein.	0.511
K3WCL8_GLOUD	K3WVU9_GLOUD	K3WCL8	K3WVU9	Uncharacterized protein.	Uncharacterized protein.	0.971
K3WCL8_GLOUD	K3WYA2_GLOUD	K3WCL8	K3WYA2	Uncharacterized protein.	Uncharacterized protein.	0.790
K3WCL8_GLOUD	K3X712_GLOUD	K3WCL8	K3X712	Uncharacterized protein.	Uncharacterized protein.	0.996
K3WCL8_GLOUD	K3X9C5_GLOUD	K3WCL8	K3X9C5	Uncharacterized protein.	Uncharacterized protein.	0.511
K3WQ49_GLOUD	K3WQ50_GLOUD	K3WQ49	K3WQ50	Rap-GAP domain-containing protein.	DUF3384 domain-containing protein.	0.867
K3WQ50_GLOUD	K3WQ49_GLOUD	K3WQ50	K3WQ49	DUF3384 domain-containing protein.	Rap-GAP domain-containing protein.	0.867
K3WVU9_GLOUD	K3W8A0_GLOUD	K3WVU9	K3W8A0	Uncharacterized protein.	ACT_7 domain-containing protein.	0.508
K3WVU9_GLOUD	K3WCL8_GLOUD	K3WVU9	K3WCL8	Uncharacterized protein.	Uncharacterized protein.	0.971
K3WVU9_GLOUD	K3WYA2_GLOUD	K3WVU9	K3WYA2	Uncharacterized protein.	Uncharacterized protein.	0.686
K3WVU9_GLOUD	K3X712_GLOUD	K3WVU9	K3X712	Uncharacterized protein.	Uncharacterized protein.	0.972
K3WVU9_GLOUD	K3X9C5_GLOUD	K3WVU9	K3X9C5	Uncharacterized protein.	Uncharacterized protein.	0.508
K3WYA2_GLOUD	K3WCL8_GLOUD	K3WYA2	K3WCL8	Uncharacterized protein.	Uncharacterized protein.	0.790
K3WYA2_GLOUD	K3WVU9_GLOUD	K3WYA2	K3WVU9	Uncharacterized protein.	Uncharacterized protein.	0.686
K3WYA2_GLOUD	K3X712_GLOUD	K3WYA2	K3X712	Uncharacterized protein.	Uncharacterized protein.	0.842
K3X712_GLOUD	K3W8A0_GLOUD	K3X712	K3W8A0	Uncharacterized protein.	ACT_7 domain-containing protein.	0.590
K3X712_GLOUD	K3WCL8_GLOUD	K3X712	K3WCL8	Uncharacterized protein.	Uncharacterized protein.	0.996