(10 nodes) Fatty acid desaturase domain network (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	K3WMW2_GLOUD	FA_desaturase domain-containing protein. (129 aa)
	K3WNL1_GLOUD	Lipid_DES domain-containing protein; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily. (352 aa)
	K3WWS5_GLOUD	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family. (323 aa)
	K3WWS6_GLOUD	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family. (324 aa)
	K3X149_GLOUD	FA_desaturase domain-containing protein. (360 aa)
	K3X150_GLOUD	FA_desaturase domain-containing protein. (359 aa)
	K3X3T2_GLOUD	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family. (321 aa)
	K3X3T9_GLOUD	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family. (321 aa)
	K3X4E3_GLOUD	Cytochrome b5 heme-binding domain-containing protein. (477 aa)
	K3XBD2_GLOUD	FA_desaturase domain-containing protein. (143 aa)

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3WWS5_GLOUD	K3X4E3_GLOUD	K3WWS5	K3X4E3	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	Cytochrome b5 heme-binding domain-containing protein.	0.535
K3WWS5_GLOUD	K3XBD2_GLOUD	K3WWS5	K3XBD2	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	FA_desaturase domain-containing protein.	0.535
K3WWS6_GLOUD	K3X4E3_GLOUD	K3WWS6	K3X4E3	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	Cytochrome b5 heme-binding domain-containing protein.	0.535
K3WWS6_GLOUD	K3XBD2_GLOUD	K3WWS6	K3XBD2	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	FA_desaturase domain-containing protein.	0.535
K3X3T2_GLOUD	K3X4E3_GLOUD	K3X3T2	K3X4E3	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	Cytochrome b5 heme-binding domain-containing protein.	0.535
K3X3T2_GLOUD	K3XBD2_GLOUD	K3X3T2	K3XBD2	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	FA_desaturase domain-containing protein.	0.535
K3X3T9_GLOUD	K3X4E3_GLOUD	K3X3T9	K3X4E3	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	Cytochrome b5 heme-binding domain-containing protein.	0.535
K3X3T9_GLOUD	K3XBD2_GLOUD	K3X3T9	K3XBD2	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	FA_desaturase domain-containing protein.	0.535
K3X4E3_GLOUD	K3WWS5_GLOUD	K3X4E3	K3WWS5	Cytochrome b5 heme-binding domain-containing protein.	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	0.535
K3X4E3_GLOUD	K3WWS6_GLOUD	K3X4E3	K3WWS6	Cytochrome b5 heme-binding domain-containing protein.	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	0.535
K3X4E3_GLOUD	K3X3T2_GLOUD	K3X4E3	K3X3T2	Cytochrome b5 heme-binding domain-containing protein.	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	0.535
K3X4E3_GLOUD	K3X3T9_GLOUD	K3X4E3	K3X3T9	Cytochrome b5 heme-binding domain-containing protein.	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	0.535
K3XBD2_GLOUD	K3WWS5_GLOUD	K3XBD2	K3WWS5	FA_desaturase domain-containing protein.	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	0.535
K3XBD2_GLOUD	K3WWS6_GLOUD	K3XBD2	K3WWS6	FA_desaturase domain-containing protein.	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	0.535
K3XBD2_GLOUD	K3X3T2_GLOUD	K3XBD2	K3X3T2	FA_desaturase domain-containing protein.	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	0.535
K3XBD2_GLOUD	K3X3T9_GLOUD	K3XBD2	K3X3T9	FA_desaturase domain-containing protein.	FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.	0.535