15 items (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MRPL19	Mitochondrial ribosomal protein L19. (292 aa)
	I3M212_ICTTR	Uncharacterized protein. (109 aa)
	MRPL27	Mitochondrial ribosomal protein L27. (148 aa)
	MRPL32	Mitochondrial ribosomal protein L32. (187 aa)
	MRPL13	Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. (178 aa)
	MRPS9	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (390 aa)
	I3MV02_ICTTR	RIBOSOMAL_L9 domain-containing protein. (230 aa)
	MRPS16	Mitochondrial ribosomal protein S16. (135 aa)
	MRPS6	Mitochondrial ribosomal protein S6. (109 aa)
	RPS11	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (158 aa)
	MRPL33	Mitochondrial ribosomal protein L33. (65 aa)
	ENSSTOP00000026813	Uncharacterized protein. (88 aa)
	MRPL12	Mitochondrial ribosomal protein L12. (199 aa)
	MRPL21	Mitochondrial ribosomal protein L21. (175 aa)
	Mrpl36	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (95 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSTOP00000026813	I3M212_ICTTR	ENSSTOP00000026813	ENSSTOP00000002954	Uncharacterized protein.	Uncharacterized protein.	0.999
ENSSTOP00000026813	I3MV02_ICTTR	ENSSTOP00000026813	ENSSTOP00000015947	Uncharacterized protein.	RIBOSOMAL_L9 domain-containing protein.	0.999
ENSSTOP00000026813	MRPL12	ENSSTOP00000026813	ENSSTOP00000027605	Uncharacterized protein.	Mitochondrial ribosomal protein L12.	0.999
ENSSTOP00000026813	MRPL13	ENSSTOP00000026813	ENSSTOP00000012773	Uncharacterized protein.	Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	0.999
ENSSTOP00000026813	MRPL19	ENSSTOP00000026813	ENSSTOP00000002567	Uncharacterized protein.	Mitochondrial ribosomal protein L19.	0.999
ENSSTOP00000026813	MRPL21	ENSSTOP00000026813	ENSSTOP00000029400	Uncharacterized protein.	Mitochondrial ribosomal protein L21.	0.999
ENSSTOP00000026813	MRPL27	ENSSTOP00000026813	ENSSTOP00000007965	Uncharacterized protein.	Mitochondrial ribosomal protein L27.	0.999
ENSSTOP00000026813	MRPL32	ENSSTOP00000026813	ENSSTOP00000011952	Uncharacterized protein.	Mitochondrial ribosomal protein L32.	0.999
ENSSTOP00000026813	MRPL33	ENSSTOP00000026813	ENSSTOP00000024940	Uncharacterized protein.	Mitochondrial ribosomal protein L33.	0.999
ENSSTOP00000026813	MRPS16	ENSSTOP00000026813	ENSSTOP00000020039	Uncharacterized protein.	Mitochondrial ribosomal protein S16.	0.999
ENSSTOP00000026813	MRPS6	ENSSTOP00000026813	ENSSTOP00000021088	Uncharacterized protein.	Mitochondrial ribosomal protein S6.	0.999
ENSSTOP00000026813	MRPS9	ENSSTOP00000026813	ENSSTOP00000014659	Uncharacterized protein.	Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
ENSSTOP00000026813	Mrpl36	ENSSTOP00000026813	ENSSTOP00000029405	Uncharacterized protein.	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	0.999
ENSSTOP00000026813	RPS11	ENSSTOP00000026813	ENSSTOP00000021410	Uncharacterized protein.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.999
I3M212_ICTTR	ENSSTOP00000026813	ENSSTOP00000002954	ENSSTOP00000026813	Uncharacterized protein.	Uncharacterized protein.	0.999
I3M212_ICTTR	I3MV02_ICTTR	ENSSTOP00000002954	ENSSTOP00000015947	Uncharacterized protein.	RIBOSOMAL_L9 domain-containing protein.	0.999
I3M212_ICTTR	MRPL12	ENSSTOP00000002954	ENSSTOP00000027605	Uncharacterized protein.	Mitochondrial ribosomal protein L12.	0.999
I3M212_ICTTR	MRPL13	ENSSTOP00000002954	ENSSTOP00000012773	Uncharacterized protein.	Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	0.999
I3M212_ICTTR	MRPL19	ENSSTOP00000002954	ENSSTOP00000002567	Uncharacterized protein.	Mitochondrial ribosomal protein L19.	0.999
I3M212_ICTTR	MRPL21	ENSSTOP00000002954	ENSSTOP00000029400	Uncharacterized protein.	Mitochondrial ribosomal protein L21.	0.999