12 items (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SHCBP1L	SHC binding and spindle associated 1 like. (556 aa)
	RBM47	RNA binding motif protein 47. (595 aa)
	I3M6M8_ICTTR	RRM domain-containing protein. (122 aa)
	SRPX	Sushi repeat containing protein X-linked. (463 aa)
	YBX2	Y-box binding protein 2. (274 aa)
	ZFYVE28	Zinc finger FYVE-type containing 28. (910 aa)
	ZCCHC24	Zinc finger CCHC-type containing 24. (241 aa)
	APOBEC1	Apolipoprotein B mRNA editing enzyme catalytic subunit 1. (175 aa)
	HSF5	Heat shock transcription factor 5. (619 aa)
	APOBEC2	Apolipoprotein B mRNA editing enzyme catalytic subunit 2. (224 aa)
	LOC101972463	G_PROTEIN_RECEP_F1_2 domain-containing protein. (313 aa)
	RBM46	RNA binding motif protein 46. (533 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APOBEC1	APOBEC2	ENSSTOP00000016053	ENSSTOP00000019629	Apolipoprotein B mRNA editing enzyme catalytic subunit 1.	Apolipoprotein B mRNA editing enzyme catalytic subunit 2.	0.673
APOBEC1	I3M6M8_ICTTR	ENSSTOP00000016053	ENSSTOP00000005159	Apolipoprotein B mRNA editing enzyme catalytic subunit 1.	RRM domain-containing protein.	0.874
APOBEC1	RBM46	ENSSTOP00000016053	ENSSTOP00000030651	Apolipoprotein B mRNA editing enzyme catalytic subunit 1.	RNA binding motif protein 46.	0.574
APOBEC1	RBM47	ENSSTOP00000016053	ENSSTOP00000004238	Apolipoprotein B mRNA editing enzyme catalytic subunit 1.	RNA binding motif protein 47.	0.783
APOBEC2	APOBEC1	ENSSTOP00000019629	ENSSTOP00000016053	Apolipoprotein B mRNA editing enzyme catalytic subunit 2.	Apolipoprotein B mRNA editing enzyme catalytic subunit 1.	0.673
APOBEC2	I3M6M8_ICTTR	ENSSTOP00000019629	ENSSTOP00000005159	Apolipoprotein B mRNA editing enzyme catalytic subunit 2.	RRM domain-containing protein.	0.801
APOBEC2	RBM46	ENSSTOP00000019629	ENSSTOP00000030651	Apolipoprotein B mRNA editing enzyme catalytic subunit 2.	RNA binding motif protein 46.	0.562
APOBEC2	RBM47	ENSSTOP00000019629	ENSSTOP00000004238	Apolipoprotein B mRNA editing enzyme catalytic subunit 2.	RNA binding motif protein 47.	0.769
HSF5	YBX2	ENSSTOP00000018881	ENSSTOP00000007729	Heat shock transcription factor 5.	Y-box binding protein 2.	0.589
I3M6M8_ICTTR	APOBEC1	ENSSTOP00000005159	ENSSTOP00000016053	RRM domain-containing protein.	Apolipoprotein B mRNA editing enzyme catalytic subunit 1.	0.874
I3M6M8_ICTTR	APOBEC2	ENSSTOP00000005159	ENSSTOP00000019629	RRM domain-containing protein.	Apolipoprotein B mRNA editing enzyme catalytic subunit 2.	0.801
I3M6M8_ICTTR	YBX2	ENSSTOP00000005159	ENSSTOP00000007729	RRM domain-containing protein.	Y-box binding protein 2.	0.536
RBM46	APOBEC1	ENSSTOP00000030651	ENSSTOP00000016053	RNA binding motif protein 46.	Apolipoprotein B mRNA editing enzyme catalytic subunit 1.	0.574
RBM46	APOBEC2	ENSSTOP00000030651	ENSSTOP00000019629	RNA binding motif protein 46.	Apolipoprotein B mRNA editing enzyme catalytic subunit 2.	0.562
RBM46	YBX2	ENSSTOP00000030651	ENSSTOP00000007729	RNA binding motif protein 46.	Y-box binding protein 2.	0.536
RBM46	ZFYVE28	ENSSTOP00000030651	ENSSTOP00000010960	RNA binding motif protein 46.	Zinc finger FYVE-type containing 28.	0.606
RBM47	APOBEC1	ENSSTOP00000004238	ENSSTOP00000016053	RNA binding motif protein 47.	Apolipoprotein B mRNA editing enzyme catalytic subunit 1.	0.783
RBM47	APOBEC2	ENSSTOP00000004238	ENSSTOP00000019629	RNA binding motif protein 47.	Apolipoprotein B mRNA editing enzyme catalytic subunit 2.	0.769
RBM47	YBX2	ENSSTOP00000004238	ENSSTOP00000007729	RNA binding motif protein 47.	Y-box binding protein 2.	0.536
RBM47	ZCCHC24	ENSSTOP00000004238	ENSSTOP00000012426	RNA binding motif protein 47.	Zinc finger CCHC-type containing 24.	0.515