73 items (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TBC1D32	TBC1 domain family member 32. (1295 aa)
	Fam149b1	DUF3719 domain-containing protein. (298 aa)
	SPAM1	Hyaluronidase. (522 aa)
	I3M0U3_ICTTR	Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family. (270 aa)
	GANAB	Glucosidase II alpha subunit; Belongs to the glycosyl hydrolase 31 family. (966 aa)
	ARSG	Arylsulfatase G. (525 aa)
	PRKCSH	Protein kinase C substrate 80K-H. (533 aa)
	MGAM	Maltase-glucoamylase. (1489 aa)
	NAGLU	N-acetyl-alpha-glucosaminidase. (743 aa)
	HPSE2	Heparanase 2 (inactive). (592 aa)
	STC2	Stanniocalcin 2. (302 aa)
	GLA	Alpha-galactosidase. (427 aa)
	SGSH	N-sulfoglucosamine sulfohydrolase. (502 aa)
	UGT8	UDP glycosyltransferase 8; Belongs to the UDP-glycosyltransferase family. (541 aa)
	PRSS58	Serine protease 58; Belongs to the peptidase S1 family. (241 aa)
	LOC101967703	Uncharacterized protein. (236 aa)
	HEXB	Beta-hexosaminidase. (538 aa)
	HPSE	Heparanase. (539 aa)
	GUSB	Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family. (575 aa)
	SCPEP1	Carboxypeptidase; Belongs to the peptidase S10 family. (401 aa)
	Fam149a	DUF3719 domain-containing protein. (800 aa)
	GLB1	Beta-galactosidase. (668 aa)
	MYORG	Myogenesis regulating glycosidase (putative); Belongs to the glycosyl hydrolase 31 family. (714 aa)
	C9orf24	Chromosome 9 open reading frame 24. (237 aa)
	GLB1L3	Beta-galactosidase. (646 aa)
	I3MFB7_ICTTR	Uncharacterized protein. (254 aa)
	Sumf2	FGE-sulfatase domain-containing protein. (297 aa)
	CPVL	Carboxypeptidase vitellogenic like; Belongs to the peptidase S10 family. (475 aa)
	GLB1L	Galactosidase beta 1 like; Belongs to the glycosyl hydrolase 35 family. (649 aa)
	MANBA	Mannosidase beta. (793 aa)
	Ids	Sulfatase domain-containing protein. (551 aa)
	FUCA1	Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. (432 aa)
	NEU3	Neuraminidase 3. (435 aa)
	FUCA2	Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. (467 aa)
	NEU1	Neuraminidase 1. (416 aa)
	SI	Sucrase-isomaltase. (1629 aa)
	GAL3ST1	Galactose-3-O-sulfotransferase 1. (424 aa)
	GNS	N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family. (552 aa)
	ARSJ	Arylsulfatase family member J. (606 aa)
	SULF2	Extracellular sulfatase; Exhibits arylsulfatase activity and highly specific endoglucosamine-6-sulfatase activity. It can remove sulfate from the C- 6 position of glucosamine within specific subregions of intact heparin. Belongs to the sulfatase family. (872 aa)
	ARSK	Arylsulfatase family member K. (538 aa)
	MGAM2	Maltase-glucoamylase 2 (putative). (1816 aa)
	ARSA	Arylsulfatase A. (510 aa)
	HGSNAT	Heparan-alpha-glucosaminide N-acetyltransferase. (666 aa)
	LOC101976844	Hyaluronidase. (485 aa)
	HIRIP3	HIRA interacting protein 3. (573 aa)
	CTSA	Carboxypeptidase; Belongs to the peptidase S10 family. (475 aa)
	SLC24A2	Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (665 aa)
	Hexd	Uncharacterized protein. (425 aa)
	FUT11	Alpha-(1,3)-fucosyltransferase; Probable fucosyltransferase; Belongs to the glycosyltransferase 10 family. (493 aa)
	ARSI	Arylsulfatase family member I. (572 aa)
	Zbtb8b	Uncharacterized protein. (515 aa)
	NEU2	Neuraminidase 2. (388 aa)
	GALNS	Galactosamine (N-acetyl)-6-sulfatase. (469 aa)
	LOC101973966	Alpha-amylase. (511 aa)
	SUMF1	Sulfatase modifying factor 1. (340 aa)
	ARSD	Arylsulfatase D. (603 aa)
	GM2A	GM2 ganglioside activator. (192 aa)
	LOC101977326	Beta-galactosidase. (612 aa)
	FUT10	Alpha-(1,3)-fucosyltransferase; Probable fucosyltransferase; Belongs to the glycosyltransferase 10 family. (481 aa)
	HYAL3	Hyaluronidase. (415 aa)
	IDUA	Iduronidase alpha-L-. (639 aa)
	Bod1	Uncharacterized protein. (145 aa)
	ARHGAP6	Rho GTPase activating protein 6. (893 aa)
	HYAL2	Hyaluronidase. (472 aa)
	GBA3	Glucosylceramidase beta 3 (gene/pseudogene); Belongs to the glycosyl hydrolase 1 family. (472 aa)
	BOD1L1	Biorientation of chromosomes in cell division 1 like 1. (2713 aa)
	Ganc	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (913 aa)
	ENSSTOP00000030752	P-type domain-containing protein; Belongs to the glycosyl hydrolase 31 family. (902 aa)
	ENSSTOP00000030853	P-type domain-containing protein. (219 aa)
	Hexa	Beta-hexosaminidase. (527 aa)
	ARSB	Arylsulfatase B. (531 aa)
	LOC101962251	DUF3719 domain-containing protein. (401 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARHGAP6	C9orf24	ENSSTOP00000025217	ENSSTOP00000009071	Rho GTPase activating protein 6.	Chromosome 9 open reading frame 24.	0.496
ARHGAP6	ENSSTOP00000030752	ENSSTOP00000025217	ENSSTOP00000030752	Rho GTPase activating protein 6.	P-type domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	0.496
ARHGAP6	ENSSTOP00000030853	ENSSTOP00000025217	ENSSTOP00000030853	Rho GTPase activating protein 6.	P-type domain-containing protein.	0.496
ARHGAP6	GANAB	ENSSTOP00000025217	ENSSTOP00000002643	Rho GTPase activating protein 6.	Glucosidase II alpha subunit; Belongs to the glycosyl hydrolase 31 family.	0.515
ARHGAP6	Ganc	ENSSTOP00000025217	ENSSTOP00000029079	Rho GTPase activating protein 6.	Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.	0.496
ARHGAP6	I3M0U3_ICTTR	ENSSTOP00000025217	ENSSTOP00000002369	Rho GTPase activating protein 6.	Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.	0.496
ARHGAP6	MGAM	ENSSTOP00000025217	ENSSTOP00000003004	Rho GTPase activating protein 6.	Maltase-glucoamylase.	0.496
ARHGAP6	MGAM2	ENSSTOP00000025217	ENSSTOP00000015340	Rho GTPase activating protein 6.	Maltase-glucoamylase 2 (putative).	0.496
ARHGAP6	MYORG	ENSSTOP00000025217	ENSSTOP00000009065	Rho GTPase activating protein 6.	Myogenesis regulating glycosidase (putative); Belongs to the glycosyl hydrolase 31 family.	0.496
ARHGAP6	SI	ENSSTOP00000025217	ENSSTOP00000012189	Rho GTPase activating protein 6.	Sucrase-isomaltase.	0.496
ARSA	ARSB	ENSSTOP00000015501	ENSSTOP00000032138	Arylsulfatase A.	Arylsulfatase B.	0.908
ARSA	ARSD	ENSSTOP00000015501	ENSSTOP00000022183	Arylsulfatase A.	Arylsulfatase D.	0.570
ARSA	ARSG	ENSSTOP00000015501	ENSSTOP00000002784	Arylsulfatase A.	Arylsulfatase G.	0.854
ARSA	ARSI	ENSSTOP00000015501	ENSSTOP00000018591	Arylsulfatase A.	Arylsulfatase family member I.	0.855
ARSA	ARSJ	ENSSTOP00000015501	ENSSTOP00000013805	Arylsulfatase A.	Arylsulfatase family member J.	0.877
ARSA	ARSK	ENSSTOP00000015501	ENSSTOP00000014815	Arylsulfatase A.	Arylsulfatase family member K.	0.676
ARSA	GALNS	ENSSTOP00000015501	ENSSTOP00000019686	Arylsulfatase A.	Galactosamine (N-acetyl)-6-sulfatase.	0.818
ARSA	GLA	ENSSTOP00000015501	ENSSTOP00000004280	Arylsulfatase A.	Alpha-galactosidase.	0.894
ARSA	GLB1	ENSSTOP00000015501	ENSSTOP00000008994	Arylsulfatase A.	Beta-galactosidase.	0.528
ARSA	GLB1L	ENSSTOP00000015501	ENSSTOP00000009948	Arylsulfatase A.	Galactosidase beta 1 like; Belongs to the glycosyl hydrolase 35 family.	0.477