10 items (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I3LWU8_ICTTR	Uncharacterized protein. (69 aa)
	USP1	Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family. (719 aa)
	DMWD	DM1 locus, WD repeat containing. (685 aa)
	WDR20	WD repeat domain 20. (581 aa)
	USP12	Ubiquitin specific peptidase 12; Belongs to the peptidase C19 family. (370 aa)
	WDR48	WD repeat domain 48. (677 aa)
	USP35	Ubiquitin specific peptidase 35; Belongs to the peptidase C19 family. (1007 aa)
	USP37	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (976 aa)
	BRWD3	Bromodomain and WD repeat domain containing 3. (1798 aa)
	USP46	Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family. (366 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BRWD3	USP1	ENSSTOP00000030840	ENSSTOP00000004450	Bromodomain and WD repeat domain containing 3.	Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family.	0.571
BRWD3	USP12	ENSSTOP00000030840	ENSSTOP00000010197	Bromodomain and WD repeat domain containing 3.	Ubiquitin specific peptidase 12; Belongs to the peptidase C19 family.	0.571
BRWD3	USP35	ENSSTOP00000030840	ENSSTOP00000022107	Bromodomain and WD repeat domain containing 3.	Ubiquitin specific peptidase 35; Belongs to the peptidase C19 family.	0.571
BRWD3	USP46	ENSSTOP00000030840	ENSSTOP00000031691	Bromodomain and WD repeat domain containing 3.	Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family.	0.571
BRWD3	WDR48	ENSSTOP00000030840	ENSSTOP00000016750	Bromodomain and WD repeat domain containing 3.	WD repeat domain 48.	0.676
DMWD	USP1	ENSSTOP00000005476	ENSSTOP00000004450	DM1 locus, WD repeat containing.	Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family.	0.873
DMWD	USP12	ENSSTOP00000005476	ENSSTOP00000010197	DM1 locus, WD repeat containing.	Ubiquitin specific peptidase 12; Belongs to the peptidase C19 family.	0.973
DMWD	USP35	ENSSTOP00000005476	ENSSTOP00000022107	DM1 locus, WD repeat containing.	Ubiquitin specific peptidase 35; Belongs to the peptidase C19 family.	0.873
DMWD	USP37	ENSSTOP00000005476	ENSSTOP00000028895	DM1 locus, WD repeat containing.	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.	0.593
DMWD	USP46	ENSSTOP00000005476	ENSSTOP00000031691	DM1 locus, WD repeat containing.	Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family.	0.957
DMWD	WDR48	ENSSTOP00000005476	ENSSTOP00000016750	DM1 locus, WD repeat containing.	WD repeat domain 48.	0.981
I3LWU8_ICTTR	USP1	ENSSTOP00000000484	ENSSTOP00000004450	Uncharacterized protein.	Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family.	0.868
I3LWU8_ICTTR	USP12	ENSSTOP00000000484	ENSSTOP00000010197	Uncharacterized protein.	Ubiquitin specific peptidase 12; Belongs to the peptidase C19 family.	0.699
I3LWU8_ICTTR	USP35	ENSSTOP00000000484	ENSSTOP00000022107	Uncharacterized protein.	Ubiquitin specific peptidase 35; Belongs to the peptidase C19 family.	0.430
I3LWU8_ICTTR	USP46	ENSSTOP00000000484	ENSSTOP00000031691	Uncharacterized protein.	Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family.	0.843
I3LWU8_ICTTR	WDR48	ENSSTOP00000000484	ENSSTOP00000016750	Uncharacterized protein.	WD repeat domain 48.	0.951
USP1	BRWD3	ENSSTOP00000004450	ENSSTOP00000030840	Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family.	Bromodomain and WD repeat domain containing 3.	0.571
USP1	DMWD	ENSSTOP00000004450	ENSSTOP00000005476	Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family.	DM1 locus, WD repeat containing.	0.873
USP1	I3LWU8_ICTTR	ENSSTOP00000004450	ENSSTOP00000000484	Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family.	Uncharacterized protein.	0.868
USP1	WDR20	ENSSTOP00000004450	ENSSTOP00000005841	Ubiquitin specific peptidase 1; Belongs to the peptidase C19 family.	WD repeat domain 20.	0.873