STRINGSTRING
ERCC6 ERCC6 ERCC8 ERCC8 APTX APTX TDP1 TDP1 APLF APLF SIRT1 SIRT1 XRCC1 XRCC1 TNP1 TNP1 I3N1G5_ICTTR I3N1G5_ICTTR LIG4 LIG4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1521 aa)
ERCC8ERCC excision repair 8, CSA ubiquitin ligase complex subunit. (396 aa)
APTXAprataxin. (334 aa)
TDP1Tyrosyl-DNA phosphodiesterase 1. (618 aa)
APLFAprataxin and PNKP like factor. (519 aa)
SIRT1Sirtuin 1. (602 aa)
XRCC1X-ray repair cross complementing 1. (632 aa)
TNP1Transition protein 1. (55 aa)
I3N1G5_ICTTRUncharacterized protein; Belongs to the transient receptor (TC 1.A.4) family. (1263 aa)
LIG4DNA ligase. (911 aa)
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.