STRINGSTRING
ITGB1 ITGB1 ITGA5 ITGA5 TNIP2 TNIP2 CD40LG CD40LG Cd86 Cd86 Rnf31 Rnf31 LOC101962631 LOC101962631 TRAF3IP2 TRAF3IP2 LOC101963381 LOC101963381 CD40 CD40 PHB2 PHB2 Phb Phb
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ITGB1Integrin beta; Belongs to the integrin beta chain family. (798 aa)
ITGA5Integrin subunit alpha 5; Belongs to the integrin alpha chain family. (1105 aa)
TNIP2TNFAIP3 interacting protein 2. (338 aa)
CD40LGCD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching. (259 aa)
Cd86Ig-like domain-containing protein. (289 aa)
Rnf31Uncharacterized protein. (1071 aa)
LOC101962631Prohibitin. (247 aa)
TRAF3IP2TRAF3 interacting protein 2. (476 aa)
LOC101963381Prohibitin. (297 aa)
CD40CD40 molecule. (284 aa)
PHB2Prohibitin. (299 aa)
PhbProhibitin. (272 aa)
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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