STRINGSTRING
UTP11 UTP11 I3N0G8_ICTTR I3N0G8_ICTTR FAM207A FAM207A LAS1L LAS1L UTP3 UTP3 HUNK HUNK CASP10 CASP10 SRFBP1 SRFBP1 WDR74 WDR74 RPS7 RPS7 RRS1 RRS1 MRTO4 MRTO4 NOC4L NOC4L IMP3 IMP3 ENSSTOP00000026589 ENSSTOP00000026589 NIP7 NIP7 FTSJ3 FTSJ3 UTP18 UTP18 FBLL1 FBLL1 BOP1 BOP1 WDR12 WDR12 RRP9 RRP9 WDR46 WDR46 WDR3 WDR3 NOP9 NOP9 UTP23 UTP23 RRP15 RRP15 NOB1 NOB1 ZNF622 ZNF622 EMG1 EMG1 RRP7A RRP7A EBNA1BP2 EBNA1BP2 MPHOSPH10 MPHOSPH10 NOL10 NOL10 NOP58 NOP58 XRCC5 XRCC5 RIOK3 RIOK3 RIOK2 RIOK2 HEATR1 HEATR1 MAK16 MAK16 NSA2 NSA2 DCAF13 DCAF13 FCF1 FCF1 Utp14a Utp14a RPF1 RPF1 RIOK1 RIOK1 SNU13 SNU13 RRP36 RRP36 NOP14 NOP14 PRKDC PRKDC NOC2L NOC2L LOC101961182 LOC101961182 RRP1 RRP1 CASP8 CASP8 RRP1B RRP1B TSR1 TSR1 FBL FBL NOP56 NOP56 NGDN NGDN IMP4 IMP4 BYSL BYSL UTP25 UTP25 MDN1 MDN1 UTP20 UTP20 UTP4 UTP4 UTP6 UTP6 NOL6 NOL6 RSL1D1 RSL1D1 BMS1 BMS1 WDR36 WDR36 PDCD11 PDCD11 Pwp2 Pwp2 PES1 PES1 EIF6 EIF6 KRR1 KRR1 TBL3 TBL3 Ltv1 Ltv1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UTP11U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (253 aa)
I3N0G8_ICTTRRibosomal_L7Ae domain-containing protein. (116 aa)
FAM207AFamily with sequence similarity 207 member A. (175 aa)
LAS1LLAS1 like, ribosome biogenesis factor. (735 aa)
UTP3UTP3 small subunit processome component. (473 aa)
HUNKHormonally up-regulated Neu-associated kinase. (715 aa)
CASP10Caspase 10; Belongs to the peptidase C14A family. (480 aa)
SRFBP1Serum response factor binding protein 1. (438 aa)
WDR74WD repeat domain 74. (385 aa)
RPS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (145 aa)
RRS1Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (365 aa)
MRTO4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (239 aa)
NOC4LNucleolar complex associated 4 homolog. (515 aa)
IMP3IMP U3 small nucleolar ribonucleoprotein 3. (184 aa)
ENSSTOP00000026589Uncharacterized protein. (154 aa)
NIP760S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
FTSJ3pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (837 aa)
UTP18UTP18 small subunit processome component. (555 aa)
FBLL1Fibrillarin like 1. (209 aa)
BOP1Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (743 aa)
WDR12Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (423 aa)
RRP9Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (475 aa)
WDR46WD repeat domain 46. (619 aa)
WDR3WD repeat domain 3. (943 aa)
NOP9NOP9 nucleolar protein. (642 aa)
UTP23UTP23 small subunit processome component. (248 aa)
RRP15Ribosomal RNA processing 15 homolog. (283 aa)
NOB1RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (405 aa)
ZNF622Zinc finger protein 622. (477 aa)
EMG1EMG1 N1-specific pseudouridine methyltransferase. (244 aa)
RRP7ARibosomal RNA processing 7 homolog A. (280 aa)
EBNA1BP2EBNA1 binding protein 2. (201 aa)
MPHOSPH10U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (679 aa)
NOL10Nucleolar protein 10. (685 aa)
NOP58NOP58 ribonucleoprotein. (530 aa)
XRCC5X-ray repair cross complementing 5. (734 aa)
RIOK3Serine/threonine-protein kinase RIO3; Involved in regulation of type I interferon (IFN)-dependent immune response which plays a critical role in the innate immune response against DNA and RNA viruses. (519 aa)
RIOK2RIO kinase 2. (550 aa)
HEATR1HEAT repeat containing 1. (2140 aa)
MAK16Protein MAK16 homolog; Belongs to the MAK16 family. (298 aa)
NSA2Uncharacterized protein. (171 aa)
DCAF13DDB1 and CUL4 associated factor 13. (445 aa)
FCF1PINc domain-containing protein. (199 aa)
Utp14aUncharacterized protein. (771 aa)
RPF1Ribosome production factor 1 homolog. (349 aa)
RIOK1Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (569 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
RRP36Ribosomal RNA processing 36. (235 aa)
NOP14NOP14 nucleolar protein. (860 aa)
PRKDCProtein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4130 aa)
NOC2LNOC2 like nucleolar associated transcriptional repressor. (667 aa)
LOC101961182Brix domain-containing protein. (468 aa)
RRP1Ribosomal RNA processing 1. (422 aa)
CASP8Caspase 8; Belongs to the peptidase C14A family. (520 aa)
RRP1BRibosomal RNA processing 1B. (755 aa)
TSR1TSR1 ribosome maturation factor. (805 aa)
FBLFibrillarin. (322 aa)
NOP56NOP56 ribonucleoprotein. (595 aa)
NGDNNeuroguidin. (315 aa)
IMP4IMP U3 small nucleolar ribonucleoprotein 4. (299 aa)
BYSLBystin like. (437 aa)
UTP25UTP25 small subunit processor component. (756 aa)
MDN1Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5487 aa)
UTP20UTP20 small subunit processome component. (2790 aa)
UTP4UTP4 small subunit processome component. (686 aa)
UTP6UTP6 small subunit processome component. (597 aa)
NOL6Nucleolar protein 6. (1154 aa)
RSL1D1Ribosomal L1 domain containing 1. (417 aa)
BMS1BMS1 ribosome biogenesis factor. (1280 aa)
WDR36WD repeat domain 36. (1014 aa)
PDCD11Programmed cell death 11. (1848 aa)
Pwp2Uncharacterized protein. (923 aa)
PES1Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome; Belongs to the pescadillo family. (585 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Behaves as a stimulatory translation initiation factor downstream insulin/growth factors. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. Cytoplasmic release of TIF6 from 60S subunits and nuclear relocalization is promoted by a RACK1 (RACK1)- dependent protein kinase C activity. In tissues responsive to insulin, contro [...] (251 aa)
KRR1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (381 aa)
TBL3Transducin beta like 3. (800 aa)
Ltv1LTV1 ribosome biogenesis factor. (474 aa)
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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