11 items (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CLIP3	CAP-Gly domain containing linker protein 3. (547 aa)
	PSAP	Prosaposin; Prosaposin: Behaves as a myelinotrophic and neurotrophic factor, these effects are mediated by its G-protein-coupled receptors, GPR37 and GPR37L1, undergoing ligand-mediated internalization followed by ERK phosphorylation signaling. (551 aa)
	LAMA1	Laminin subunit alpha 1. (3004 aa)
	LAMC1	Laminin subunit gamma 1. (1608 aa)
	Mag	Uncharacterized protein. (64 aa)
	IL2	Interleukin-2; Produced by T-cells in response to antigenic or mitogenic stimulation, this protein is required for T-cell proliferation and other activities crucial to regulation of the immune response. Belongs to the IL-2 family. (154 aa)
	CEL	Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (558 aa)
	EPDR1	Ependymin related 1. (226 aa)
	RTN4R	Reticulon 4 receptor. (473 aa)
	LAMB1	Laminin subunit beta 1. (1785 aa)
	LYN	Tyrosine-protein kinase. (512 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LAMA1	LAMB1	ENSSTOP00000007715	ENSSTOP00000024024	Laminin subunit alpha 1.	Laminin subunit beta 1.	0.924
LAMA1	LAMC1	ENSSTOP00000007715	ENSSTOP00000008015	Laminin subunit alpha 1.	Laminin subunit gamma 1.	0.804
LAMB1	LAMA1	ENSSTOP00000024024	ENSSTOP00000007715	Laminin subunit beta 1.	Laminin subunit alpha 1.	0.924
LAMB1	LAMC1	ENSSTOP00000024024	ENSSTOP00000008015	Laminin subunit beta 1.	Laminin subunit gamma 1.	0.998
LAMC1	LAMA1	ENSSTOP00000008015	ENSSTOP00000007715	Laminin subunit gamma 1.	Laminin subunit alpha 1.	0.804
LAMC1	LAMB1	ENSSTOP00000008015	ENSSTOP00000024024	Laminin subunit gamma 1.	Laminin subunit beta 1.	0.998
LYN	Mag	ENSSTOP00000029495	ENSSTOP00000008930	Tyrosine-protein kinase.	Uncharacterized protein.	0.481
Mag	LYN	ENSSTOP00000008930	ENSSTOP00000029495	Uncharacterized protein.	Tyrosine-protein kinase.	0.481
Mag	RTN4R	ENSSTOP00000008930	ENSSTOP00000023620	Uncharacterized protein.	Reticulon 4 receptor.	0.733
RTN4R	Mag	ENSSTOP00000023620	ENSSTOP00000008930	Reticulon 4 receptor.	Uncharacterized protein.	0.733