(13 nodes) Eosinophil chemotaxis network (Ictidomys tridecemlineatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CCL26	C-C motif chemokine. (91 aa)
	CCL24	C-C motif chemokine. (119 aa)
	CCL1	C-C motif chemokine ligand 1. (94 aa)
	CCL11	C-C motif chemokine ligand 11. (97 aa)
	LOC101968597	C-C motif chemokine. (92 aa)
	LOC101968303	C-C motif chemokine. (93 aa)
	HRH1	Histamine receptor H1; Belongs to the G-protein coupled receptor 1 family. (488 aa)
	CCL21	C-C motif chemokine ligand 21. (133 aa)
	CCL8	C-C motif chemokine. (98 aa)
	SCG2	Secretogranin II. (579 aa)
	LGALS3	Galectin. (220 aa)
	CX3CL1	C-X3-C motif chemokine ligand 1. (397 aa)
	CCL7	C-C motif chemokine ligand 7. (96 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCL1	CCL21	ENSSTOP00000006614	ENSSTOP00000018627	C-C motif chemokine ligand 1.	C-C motif chemokine ligand 21.	0.514
CCL1	CCL24	ENSSTOP00000006614	ENSSTOP00000004463	C-C motif chemokine ligand 1.	C-C motif chemokine.	0.453
CCL1	CX3CL1	ENSSTOP00000006614	ENSSTOP00000023014	C-C motif chemokine ligand 1.	C-X3-C motif chemokine ligand 1.	0.605
CCL1	LOC101968303	ENSSTOP00000006614	ENSSTOP00000011933	C-C motif chemokine ligand 1.	C-C motif chemokine.	0.544
CCL1	LOC101968597	ENSSTOP00000006614	ENSSTOP00000011929	C-C motif chemokine ligand 1.	C-C motif chemokine.	0.575
CCL11	CCL24	ENSSTOP00000011390	ENSSTOP00000004463	C-C motif chemokine ligand 11.	C-C motif chemokine.	0.855
CCL11	CCL26	ENSSTOP00000011390	ENSSTOP00000025863	C-C motif chemokine ligand 11.	C-C motif chemokine.	0.983
CCL11	CCL7	ENSSTOP00000011390	ENSSTOP00000031852	C-C motif chemokine ligand 11.	C-C motif chemokine ligand 7.	0.854
CCL11	CCL8	ENSSTOP00000011390	ENSSTOP00000019381	C-C motif chemokine ligand 11.	C-C motif chemokine.	0.822
CCL11	CX3CL1	ENSSTOP00000011390	ENSSTOP00000023014	C-C motif chemokine ligand 11.	C-X3-C motif chemokine ligand 1.	0.543
CCL11	LOC101968303	ENSSTOP00000011390	ENSSTOP00000011933	C-C motif chemokine ligand 11.	C-C motif chemokine.	0.826
CCL11	LOC101968597	ENSSTOP00000011390	ENSSTOP00000011929	C-C motif chemokine ligand 11.	C-C motif chemokine.	0.799
CCL21	CCL1	ENSSTOP00000018627	ENSSTOP00000006614	C-C motif chemokine ligand 21.	C-C motif chemokine ligand 1.	0.514
CCL21	CCL24	ENSSTOP00000018627	ENSSTOP00000004463	C-C motif chemokine ligand 21.	C-C motif chemokine.	0.959
CCL21	CCL26	ENSSTOP00000018627	ENSSTOP00000025863	C-C motif chemokine ligand 21.	C-C motif chemokine.	0.975
CCL21	CCL7	ENSSTOP00000018627	ENSSTOP00000031852	C-C motif chemokine ligand 21.	C-C motif chemokine ligand 7.	0.520
CCL21	CX3CL1	ENSSTOP00000018627	ENSSTOP00000023014	C-C motif chemokine ligand 21.	C-X3-C motif chemokine ligand 1.	0.774
CCL21	LOC101968303	ENSSTOP00000018627	ENSSTOP00000011933	C-C motif chemokine ligand 21.	C-C motif chemokine.	0.553
CCL21	LOC101968597	ENSSTOP00000018627	ENSSTOP00000011929	C-C motif chemokine ligand 21.	C-C motif chemokine.	0.528
CCL24	CCL1	ENSSTOP00000004463	ENSSTOP00000006614	C-C motif chemokine.	C-C motif chemokine ligand 1.	0.453