STRINGSTRING
MDK MDK PKDCC PKDCC BMP4 BMP4 BMPR2 BMPR2 ZBTB16 ZBTB16 THRB THRB SMAD3 SMAD3 BMP10 BMP10 SMAD1 SMAD1 SOX6 SOX6 LOXL2 LOXL2 BMP1 BMP1 ZNF219 ZNF219 SMAD7 SMAD7 HOXA11 HOXA11 CCN1 CCN1 BMP6 BMP6 GDF6 GDF6 BMP2 BMP2 Mustn1 Mustn1 WNT5A WNT5A SOX9 SOX9 FGF18 FGF18 GDF2 GDF2 GDF5 GDF5 GLI3 GLI3 SOX5 SOX5 RUNX2 RUNX2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MDKMidkine. (143 aa)
PKDCCProtein kinase domain containing, cytoplasmic. (294 aa)
BMP4Bone morphogenetic protein 4. (409 aa)
BMPR2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1038 aa)
ZBTB16Zinc finger and BTB domain containing 16. (673 aa)
THRBThyroid hormone receptor beta. (476 aa)
SMAD3Mothers against decapentaplegic homolog. (425 aa)
BMP10Bone morphogenetic protein 10. (422 aa)
SMAD1Mothers against decapentaplegic homolog. (465 aa)
SOX6SRY-box transcription factor 6. (855 aa)
LOXL2Lysyl oxidase like 2. (776 aa)
BMP1Metalloendopeptidase. (934 aa)
ZNF219Zinc finger protein 219. (753 aa)
SMAD7Mothers against decapentaplegic homolog. (426 aa)
HOXA11Homeobox A11. (315 aa)
CCN1Cellular communication network factor 1. (381 aa)
BMP6Bone morphogenetic protein 6. (507 aa)
GDF6Growth differentiation factor 6. (460 aa)
BMP2Bone morphogenetic protein 2. (395 aa)
Mustn1Uncharacterized protein. (82 aa)
WNT5AProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (381 aa)
SOX9SRY-box transcription factor 9. (509 aa)
FGF18Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (207 aa)
GDF2Growth differentiation factor 2. (429 aa)
GDF5Growth differentiation factor 5. (495 aa)
GLI3GLI family zinc finger 3. (1582 aa)
SOX5SRY-box transcription factor 5. (763 aa)
RUNX2Runt-related transcription factor; Forms the heterodimeric complex core-binding factor (CBF) with CBFB. RUNX members modulate the transcription of their target genes through recognizing the core consensus binding sequence 5'- TGTGGT-3', or very rarely, 5'-TGCGGT-3', within their regulatory regions via their runt domain, while CBFB is a non-DNA-binding regulatory subunit that allosterically enhances the sequence-specific DNA-binding capacity of RUNX. (520 aa)
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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