STRINGSTRING
SMAD6 SMAD6 MAGI2 MAGI2 LOC101967701 LOC101967701 TDGF1 TDGF1 NODAL NODAL SYNJ2BP SYNJ2BP SAV1 SAV1 GDF9 GDF9 Inhba Inhba
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMAD6Mothers against decapentaplegic homolog. (496 aa)
MAGI2Membrane associated guanylate kinase, WW and PDZ domain containing 2. (1188 aa)
LOC101967701TGF_BETA_2 domain-containing protein. (397 aa)
TDGF1Teratocarcinoma-derived growth factor 1. (161 aa)
NODALNodal growth differentiation factor. (350 aa)
SYNJ2BPSynaptojanin 2 binding protein. (145 aa)
SAV1Salvador family WW domain containing protein 1. (335 aa)
GDF9Growth differentiation factor 9. (449 aa)
InhbaTGF_BETA_2 domain-containing protein. (133 aa)
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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