STRINGSTRING
SOX9 SOX9 WNT4 WNT4 UMOD UMOD LAMB2 LAMB2 Pkd2 Pkd2 ACAT1 ACAT1 SOX8 SOX8 CALB1 CALB1 PAX2 PAX2 NPHS2 NPHS2 CXCR2 CXCR2 PKD1 PKD1 OSR1 OSR1 Aqp1 Aqp1 WT1 WT1 WNT9B WNT9B PDGFB PDGFB HES1 HES1 HES5 HES5 PAX8 PAX8 MTSS1 MTSS1 LGR4 LGR4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SOX9SRY-box transcription factor 9. (509 aa)
WNT4Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (325 aa)
UMODUromodulin. (671 aa)
LAMB2Laminin subunit beta 2. (1846 aa)
Pkd2EF-hand domain-containing protein. (892 aa)
ACAT1Acetyl-CoA acetyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family. (427 aa)
SOX8SRY-box transcription factor 8. (466 aa)
CALB1Calbindin 1. (261 aa)
PAX2Paired box 2. (417 aa)
NPHS2NPHS2 stomatin family member, podocin. (382 aa)
CXCR2C-X-C motif chemokine receptor 2; Belongs to the G-protein coupled receptor 1 family. (359 aa)
PKD1Polycystin 1, transient receptor potential channel interacting. (4252 aa)
OSR1Odd-skipped related transcription factor 1. (266 aa)
Aqp1Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (269 aa)
WT1WT1 transcription factor. (523 aa)
WNT9BProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (373 aa)
PDGFBPlatelet derived growth factor subunit B; Belongs to the PDGF/VEGF growth factor family. (211 aa)
HES1Hes family bHLH transcription factor 1. (280 aa)
HES5Hes family bHLH transcription factor 5. (141 aa)
PAX8Paired box 8. (574 aa)
MTSS1MTSS I-BAR domain containing 1. (759 aa)
LGR4Leucine rich repeat containing G protein-coupled receptor 4. (927 aa)
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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