STRINGSTRING
CNTN6 CNTN6 GRID2 GRID2 GRIA3 GRIA3 CALB2 CALB2 SNAP91 SNAP91 SCN8A SCN8A GRIN2B GRIN2B ATP2B3 ATP2B3 ATP2B2 ATP2B2 KCNJ9 KCNJ9 SPTBN2 SPTBN2 GRIN1 GRIN1 SLC6A9 SLC6A9 PLCB4 PLCB4 CADM3 CADM3 PICALM PICALM GRIN2A GRIN2A PCLO PCLO PFN1 PFN1 SLC1A6 SLC1A6 SLC16A3 SLC16A3 CADPS2 CADPS2 CBLN1 CBLN1 UNC13C UNC13C Ppp3r1 Ppp3r1 P2RX6 P2RX6 SYNJ1 SYNJ1 KCNJ3 KCNJ3 KCNH1 KCNH1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CNTN6Contactin 6. (1028 aa)
GRID2Glutamate ionotropic receptor delta type subunit 2. (922 aa)
GRIA3Glutamate ionotropic receptor AMPA type subunit 3. (899 aa)
CALB2Calbindin 2. (271 aa)
SNAP91Synaptosome associated protein 91. (902 aa)
SCN8ASodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. (1975 aa)
GRIN2BGlutamate ionotropic receptor NMDA type subunit 2B. (1484 aa)
ATP2B3Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1220 aa)
ATP2B2Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1243 aa)
KCNJ9Potassium voltage-gated channel subfamily J member 9. (393 aa)
SPTBN2Spectrin beta chain; Belongs to the spectrin family. (2390 aa)
GRIN1Glutamate ionotropic receptor NMDA type subunit 1. (959 aa)
SLC6A9Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (685 aa)
PLCB41-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. (1206 aa)
CADM3Cell adhesion molecule 3. (430 aa)
PICALMPhosphatidylinositol binding clathrin assembly protein. (660 aa)
GRIN2AGlutamate ionotropic receptor NMDA type subunit 2A. (1423 aa)
PCLOPiccolo presynaptic cytomatrix protein. (4121 aa)
PFN1Profilin; Belongs to the profilin family. (140 aa)
SLC1A6Amino acid transporter. (564 aa)
SLC16A3Solute carrier family 16 member 3. (466 aa)
CADPS2Calcium dependent secretion activator 2. (1234 aa)
CBLN1Cerebellin 1 precursor. (183 aa)
UNC13CUnc-13 homolog C. (2117 aa)
Ppp3r1Uncharacterized protein. (169 aa)
P2RX6P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (377 aa)
SYNJ1Synaptojanin 1. (1609 aa)
KCNJ3Potassium voltage-gated channel subfamily J member 3. (499 aa)
KCNH1Potassium voltage-gated channel subfamily H member 1. (962 aa)
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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