21 items (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RANGRF	RAN guanine nucleotide release factor. (186 aa)
	TNF	Tumor necrosis factor; Belongs to the tumor necrosis factor family. (233 aa)
	AKT1	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (480 aa)
	HNRNPK	Heterogeneous nuclear ribonucleoprotein K. (464 aa)
	TM9SF4	Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (655 aa)
	ABCA7	ATP binding cassette subfamily A member 7. (2098 aa)
	CD247	CD247 molecule. (144 aa)
	MAP1A	Microtubule associated protein 1A. (3001 aa)
	TYROBP	TYRO protein tyrosine kinase binding protein. (113 aa)
	ABCA12	ATP binding cassette subfamily A member 12. (2598 aa)
	WASHC1	WASH complex subunit 1. (471 aa)
	COMMD1	Copper metabolism domain containing 1. (188 aa)
	ERBB4	Receptor protein-tyrosine kinase. (1308 aa)
	LRIG2	Leucine rich repeats and immunoglobulin like domains 2. (1062 aa)
	STX4	Syntaxin 4; Belongs to the syntaxin family. (298 aa)
	TMEM35A	Transmembrane protein 35A. (167 aa)
	RIC3	RIC3 acetylcholine receptor chaperone. (365 aa)
	DMWD	DM1 locus, WD repeat containing. (685 aa)
	WDR20	WD repeat domain 20. (581 aa)
	STX3	Syntaxin 3; Belongs to the syntaxin family. (287 aa)
	SNX33	Sorting nexin. (573 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKT1	CD247	ENSSTOP00000028457	ENSSTOP00000019964	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	CD247 molecule.	0.500
AKT1	ERBB4	ENSSTOP00000028457	ENSSTOP00000000168	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	Receptor protein-tyrosine kinase.	0.471
AKT1	TYROBP	ENSSTOP00000028457	ENSSTOP00000016862	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	TYRO protein tyrosine kinase binding protein.	0.507
CD247	AKT1	ENSSTOP00000019964	ENSSTOP00000028457	CD247 molecule.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.500
CD247	TYROBP	ENSSTOP00000019964	ENSSTOP00000016862	CD247 molecule.	TYRO protein tyrosine kinase binding protein.	0.587
ERBB4	AKT1	ENSSTOP00000000168	ENSSTOP00000028457	Receptor protein-tyrosine kinase.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.471
ERBB4	LRIG2	ENSSTOP00000000168	ENSSTOP00000000544	Receptor protein-tyrosine kinase.	Leucine rich repeats and immunoglobulin like domains 2.	0.519
LRIG2	ERBB4	ENSSTOP00000000544	ENSSTOP00000000168	Leucine rich repeats and immunoglobulin like domains 2.	Receptor protein-tyrosine kinase.	0.519
STX3	STX4	ENSSTOP00000006445	ENSSTOP00000000557	Syntaxin 3; Belongs to the syntaxin family.	Syntaxin 4; Belongs to the syntaxin family.	0.969
STX4	STX3	ENSSTOP00000000557	ENSSTOP00000006445	Syntaxin 4; Belongs to the syntaxin family.	Syntaxin 3; Belongs to the syntaxin family.	0.969
TYROBP	AKT1	ENSSTOP00000016862	ENSSTOP00000028457	TYRO protein tyrosine kinase binding protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.507
TYROBP	CD247	ENSSTOP00000016862	ENSSTOP00000019964	TYRO protein tyrosine kinase binding protein.	CD247 molecule.	0.587