STRINGSTRING
GATA3 GATA3 SPHK2 SPHK2 Brca1 Brca1 ENSSTOP00000027930 ENSSTOP00000027930 PIH1D1 PIH1D1 SMAD4 SMAD4 NAP1L2 NAP1L2 PIWIL2 PIWIL2 SMARCB1 SMARCB1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GATA3GATA binding protein 3. (444 aa)
SPHK2Sphingosine kinase 2. (655 aa)
Brca1Uncharacterized protein. (353 aa)
ENSSTOP00000027930Uncharacterized protein. (173 aa)
PIH1D1PIH1 domain containing 1. (290 aa)
SMAD4Mothers against decapentaplegic homolog. (552 aa)
NAP1L2Nucleosome assembly protein 1 like 2; Belongs to the nucleosome assembly protein (NAP) family. (458 aa)
PIWIL2Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family. (962 aa)
SMARCB1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family. (385 aa)
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
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