STRINGSTRING
TAF4 TAF4 GTF2H1 GTF2H1 TAF12 TAF12 CCNH CCNH RPRD2 RPRD2 TAF9B TAF9B TADA3 TADA3 POLR2E POLR2E RPRD1A RPRD1A GTF2H5 GTF2H5 I3M4T6_ICTTR I3M4T6_ICTTR CINP CINP GTF2A1L GTF2A1L GTF2A1 GTF2A1 POLR2K POLR2K GTF2H3 GTF2H3 TBPL1 TBPL1 RTF1 RTF1 TAF6 TAF6 POLR2I POLR2I ERCC3 ERCC3 TAF10 TAF10 TAF7 TAF7 RPRD1B RPRD1B RECQL5 RECQL5 Taf11 Taf11 CTR9 CTR9 TAF5 TAF5 PAF1 PAF1 SUPT3H SUPT3H TAF8 TAF8 Taf1 Taf1 POLR2M POLR2M TRRAP TRRAP Polr2l Polr2l SH3BP5L SH3BP5L TAF5L TAF5L GTF2F1 GTF2F1 WDR47 WDR47 TAF2 TAF2 CDC73 CDC73 POLR2D POLR2D MNAT1 MNAT1 TCEA1 TCEA1 LEO1 LEO1 POLR2F POLR2F Gtf2h2c Gtf2h2c Myzap Myzap GTF2H4 GTF2H4 PEX2 PEX2 GTF2E2 GTF2E2 GTF2A2 GTF2A2 ENSSTOP00000025974 ENSSTOP00000025974 ENSSTOP00000027307 ENSSTOP00000027307 GTF2B GTF2B Upk3bl2 Upk3bl2 ENSSTOP00000030597 ENSSTOP00000030597 GTF2F2 GTF2F2 ENSSTOP00000030987 ENSSTOP00000030987 TAF13 TAF13 KAT2A KAT2A Polr2j Polr2j Taf9 Taf9 TAF4B TAF4B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TAF4TATA-box binding protein associated factor 4. (636 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
TAF12TATA-box binding protein associated factor 12. (213 aa)
CCNHCyclin H; Belongs to the cyclin family. (323 aa)
RPRD2Regulation of nuclear pre-mRNA domain containing 2. (1470 aa)
TAF9BTATA-box binding protein associated factor 9b. (287 aa)
TADA3Transcriptional adaptor 3. (351 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
RPRD1ARegulation of nuclear pre-mRNA domain containing 1A. (312 aa)
GTF2H5General transcription factor IIH subunit 5. (74 aa)
I3M4T6_ICTTRUncharacterized protein. (243 aa)
CINPCyclin dependent kinase 2 interacting protein. (212 aa)
GTF2A1LGeneral transcription factor IIA subunit 1 like. (469 aa)
GTF2A1General transcription factor IIA subunit 1. (366 aa)
POLR2KUncharacterized protein. (58 aa)
GTF2H3General transcription factor IIH subunit 3. (309 aa)
TBPL1TATA-box binding protein like 1. (186 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (710 aa)
TAF6TATA-box binding protein associated factor 6. (678 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (218 aa)
TAF7TATA-box binding protein associated factor 7. (349 aa)
RPRD1BRegulation of nuclear pre-mRNA domain containing 1B. (326 aa)
RECQL5ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (990 aa)
Taf11TATA-box binding protein associated factor 11. (211 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1176 aa)
TAF5TATA-box binding protein associated factor 5. (787 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (529 aa)
SUPT3HSPT3 homolog, SAGA and STAGA complex component. (373 aa)
TAF8TATA-box binding protein associated factor 8. (310 aa)
Taf1Transcription initiation factor TFIID subunit. (1926 aa)
POLR2MRNA polymerase II subunit M. (322 aa)
TRRAPTransformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family. (3861 aa)
Polr2lUncharacterized protein. (83 aa)
SH3BP5LSH3 binding domain protein 5 like. (393 aa)
TAF5LTATA-box binding protein associated factor 5 like. (591 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (517 aa)
WDR47WD repeat domain 47. (921 aa)
TAF2TATA-box binding protein associated factor 2. (1212 aa)
CDC73Cell division cycle 73. (531 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
TCEA1Transcription elongation factor A1. (323 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (666 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
Gtf2h2cGeneral transcription factor IIH subunit. (395 aa)
MyzapUncharacterized protein. (415 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (463 aa)
PEX2Peroxisomal biogenesis factor 2. (305 aa)
GTF2E2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (291 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
ENSSTOP00000025974RTR1-type domain-containing protein. (86 aa)
ENSSTOP00000027307TFIIS N-terminal domain-containing protein. (73 aa)
GTF2BGeneral transcription factor IIB. (316 aa)
Upk3bl2Uncharacterized protein. (276 aa)
ENSSTOP00000030597Uncharacterized protein. (100 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
ENSSTOP00000030987Uncharacterized protein. (49 aa)
TAF13TATA-box binding protein associated factor 13. (124 aa)
KAT2AHistone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (837 aa)
Polr2jRNA polymerase II subunit J. (117 aa)
Taf9Uncharacterized protein. (265 aa)
TAF4BTATA-box binding protein associated factor 4b. (855 aa)
Your Current Organism:
Ictidomys tridecemlineatus
NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.