(13 nodes) MATH/TRAF domain network (Ictidomys tridecemlineatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SPOP	Speckle type BTB/POZ protein. (374 aa)
	TRAF6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (530 aa)
	TRAF4	TNF receptor-associated factor. (470 aa)
	MEP1B	Meprin A subunit. (690 aa)
	TRAF3	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (566 aa)
	USP7	Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family. (1085 aa)
	ENSSTOP00000029589	TNF receptor-associated factor. (402 aa)
	TRAF5	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (558 aa)
	TRAF1	TNF receptor-associated factor. (415 aa)
	SPOPL	Speckle type BTB/POZ protein like. (392 aa)
	TRIM37	Tripartite motif containing 37. (965 aa)
	TRAF2	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (501 aa)
	Mep1a	Meprin A subunit. (743 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSTOP00000029589	TRAF1	ENSSTOP00000029589	ENSSTOP00000021806	TNF receptor-associated factor.	TNF receptor-associated factor.	0.604
ENSSTOP00000029589	TRAF2	ENSSTOP00000029589	ENSSTOP00000010851	TNF receptor-associated factor.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.619
ENSSTOP00000029589	TRAF3	ENSSTOP00000029589	ENSSTOP00000000672	TNF receptor-associated factor.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.554
ENSSTOP00000029589	TRAF5	ENSSTOP00000029589	ENSSTOP00000026567	TNF receptor-associated factor.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.556
ENSSTOP00000029589	TRAF6	ENSSTOP00000029589	ENSSTOP00000006521	TNF receptor-associated factor.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.471
ENSSTOP00000029589	USP7	ENSSTOP00000029589	ENSSTOP00000030771	TNF receptor-associated factor.	Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family.	0.620
MEP1B	Mep1a	ENSSTOP00000002059	ENSSTOP00000008546	Meprin A subunit.	Meprin A subunit.	0.869
Mep1a	MEP1B	ENSSTOP00000008546	ENSSTOP00000002059	Meprin A subunit.	Meprin A subunit.	0.869
SPOP	SPOPL	ENSSTOP00000007024	ENSSTOP00000017085	Speckle type BTB/POZ protein.	Speckle type BTB/POZ protein like.	0.929
SPOPL	SPOP	ENSSTOP00000017085	ENSSTOP00000007024	Speckle type BTB/POZ protein like.	Speckle type BTB/POZ protein.	0.929
TRAF1	ENSSTOP00000029589	ENSSTOP00000021806	ENSSTOP00000029589	TNF receptor-associated factor.	TNF receptor-associated factor.	0.604
TRAF1	TRAF2	ENSSTOP00000021806	ENSSTOP00000010851	TNF receptor-associated factor.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.995
TRAF1	TRAF3	ENSSTOP00000021806	ENSSTOP00000000672	TNF receptor-associated factor.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.951
TRAF1	TRAF4	ENSSTOP00000021806	ENSSTOP00000004559	TNF receptor-associated factor.	TNF receptor-associated factor.	0.573
TRAF1	TRAF5	ENSSTOP00000021806	ENSSTOP00000026567	TNF receptor-associated factor.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.938
TRAF1	TRAF6	ENSSTOP00000021806	ENSSTOP00000006521	TNF receptor-associated factor.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.949
TRAF1	TRIM37	ENSSTOP00000021806	ENSSTOP00000011530	TNF receptor-associated factor.	Tripartite motif containing 37.	0.420
TRAF1	USP7	ENSSTOP00000021806	ENSSTOP00000030771	TNF receptor-associated factor.	Ubiquitin specific peptidase 7; Belongs to the peptidase C19 family.	0.581
TRAF2	ENSSTOP00000029589	ENSSTOP00000010851	ENSSTOP00000029589	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor.	0.619
TRAF2	TRAF1	ENSSTOP00000010851	ENSSTOP00000021806	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	TNF receptor-associated factor.	0.995