(20 nodes) Aminotransferase, class I/classII network (Ictidomys tridecemlineatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GCAT	Glycine C-acetyltransferase. (419 aa)
	GPT	Glutamic--pyruvic transaminase. (496 aa)
	ALAS2	5-aminolevulinate synthase. (587 aa)
	GOT1	Aspartate aminotransferase. (413 aa)
	Accs	Aminotran_1_2 domain-containing protein. (471 aa)
	SPTLC2	Serine palmitoyltransferase long chain base subunit 2. (549 aa)
	TAT	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate. (454 aa)
	ALAS1	5-aminolevulinate synthase. (640 aa)
	ACCSL	1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like. (543 aa)
	ENSSTOP00000029768	Aminotran_1_2 domain-containing protein. (365 aa)
	Got2	Aminotran_1_2 domain-containing protein. (274 aa)
	Kyat1	Aminotran_1_2 domain-containing protein. (424 aa)
	LOC101962681	Aminotran_1_2 domain-containing protein. (408 aa)
	LOC101977971	Aminotran_1_2 domain-containing protein. (393 aa)
	AADAT	Aminoadipate aminotransferase. (425 aa)
	Kyat3	Aminotran_1_2 domain-containing protein. (194 aa)
	GOT1L1	Glutamic-oxaloacetic transaminase 1 like 1. (415 aa)
	SPTLC3	Serine palmitoyltransferase long chain base subunit 3. (552 aa)
	GPT2	Glutamic--pyruvic transaminase 2. (441 aa)
	SPTLC1	Serine palmitoyltransferase long chain base subunit 1. (473 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AADAT	ACCSL	ENSSTOP00000021589	ENSSTOP00000001040	Aminoadipate aminotransferase.	1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like.	0.663
AADAT	Accs	ENSSTOP00000021589	ENSSTOP00000004003	Aminoadipate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.663
AADAT	ENSSTOP00000029768	ENSSTOP00000021589	ENSSTOP00000029768	Aminoadipate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.786
AADAT	GOT1	ENSSTOP00000021589	ENSSTOP00000006725	Aminoadipate aminotransferase.	Aspartate aminotransferase.	0.932
AADAT	GOT1L1	ENSSTOP00000021589	ENSSTOP00000016241	Aminoadipate aminotransferase.	Glutamic-oxaloacetic transaminase 1 like 1.	0.885
AADAT	GPT	ENSSTOP00000021589	ENSSTOP00000009103	Aminoadipate aminotransferase.	Glutamic--pyruvic transaminase.	0.663
AADAT	GPT2	ENSSTOP00000021589	ENSSTOP00000013307	Aminoadipate aminotransferase.	Glutamic--pyruvic transaminase 2.	0.663
AADAT	Got2	ENSSTOP00000021589	ENSSTOP00000031640	Aminoadipate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.786
AADAT	Kyat1	ENSSTOP00000021589	ENSSTOP00000029563	Aminoadipate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.927
AADAT	Kyat3	ENSSTOP00000021589	ENSSTOP00000016640	Aminoadipate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.919
AADAT	LOC101962681	ENSSTOP00000021589	ENSSTOP00000029178	Aminoadipate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.786
AADAT	LOC101977971	ENSSTOP00000021589	ENSSTOP00000025592	Aminoadipate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.786
AADAT	TAT	ENSSTOP00000021589	ENSSTOP00000002734	Aminoadipate aminotransferase.	Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.	0.668
ACCSL	AADAT	ENSSTOP00000001040	ENSSTOP00000021589	1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like.	Aminoadipate aminotransferase.	0.663
ACCSL	ENSSTOP00000029768	ENSSTOP00000001040	ENSSTOP00000029768	1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like.	Aminotran_1_2 domain-containing protein.	0.539
ACCSL	GOT1	ENSSTOP00000001040	ENSSTOP00000006725	1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like.	Aspartate aminotransferase.	0.539
ACCSL	GOT1L1	ENSSTOP00000001040	ENSSTOP00000016241	1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like.	Glutamic-oxaloacetic transaminase 1 like 1.	0.539
ACCSL	Got2	ENSSTOP00000001040	ENSSTOP00000031640	1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like.	Aminotran_1_2 domain-containing protein.	0.539
ACCSL	LOC101962681	ENSSTOP00000001040	ENSSTOP00000029178	1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like.	Aminotran_1_2 domain-containing protein.	0.539
ACCSL	LOC101977971	ENSSTOP00000001040	ENSSTOP00000025592	1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like.	Aminotran_1_2 domain-containing protein.	0.539