79 items (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	COPA	Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1221 aa)
	RAE1	Ribonucleic acid export 1. (368 aa)
	WDR31	WD repeat domain 31. (367 aa)
	STRAP	Serine/threonine kinase receptor associated protein. (350 aa)
	WDR82	WD repeat domain 82. (318 aa)
	PAFAH1B1	Platelet-activating factor acetylhydrolase IB subunit alpha; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. Required during brain development for the proliferation of neuronal precursors and the migration of newly formed neurons from the ven [...] (411 aa)
	RRP9	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (475 aa)
	RBBP7	RB binding protein 7, chromatin remodeling factor. (425 aa)
	WDFY2	WD repeat and FYVE domain containing 2. (400 aa)
	WDR3	WD repeat domain 3. (943 aa)
	SNRNP40	Small nuclear ribonucleoprotein U5 subunit 40. (358 aa)
	ATG16L2	Autophagy related 16 like 2. (620 aa)
	WSB2	WD repeat and SOCS box containing 2. (403 aa)
	WDR1	WD repeat domain 1. (618 aa)
	WDR70	WD repeat domain 70. (655 aa)
	GNB4	G protein subunit beta 4. (340 aa)
	ERCC8	ERCC excision repair 8, CSA ubiquitin ligase complex subunit. (396 aa)
	NLE1	Notchless homolog 1. (485 aa)
	POC1B	POC1 centriolar protein B. (473 aa)
	WDR83	WD repeat domain 83. (315 aa)
	FBXW9	F-box and WD repeat domain containing 9. (462 aa)
	RACK1	Receptor for activated C kinase 1. (317 aa)
	WDR44	WD repeat domain 44. (906 aa)
	WDR61	WD repeat domain 61. (305 aa)
	WDR38	WD repeat domain 38. (294 aa)
	Wdfy1	Uncharacterized protein. (364 aa)
	WDSUB1	WD repeat, sterile alpha motif and U-box domain containing 1. (476 aa)
	PLRG1	Pleiotropic regulator 1. (515 aa)
	GNB1	G protein subunit beta 1. (340 aa)
	PAAF1	Proteasomal ATPase associated factor 1. (441 aa)
	TBL2	Transducin beta like 2. (443 aa)
	RBBP4	RB binding protein 4, chromatin remodeling factor. (425 aa)
	TBL3	Transducin beta like 3. (800 aa)
	STRN	Striatin. (738 aa)
	GNB5	G protein subunit beta 5. (386 aa)
	Pwp2	Uncharacterized protein. (923 aa)
	COPB2	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (907 aa)
	TBL1XR1	Transducin beta like 1 X-linked receptor 1. (514 aa)
	Tbl1x	Uncharacterized protein. (530 aa)
	WDR37	WD repeat domain 37. (496 aa)
	TAF5	TATA-box binding protein associated factor 5. (787 aa)
	GNB3	G protein subunit beta 3. (340 aa)
	GNB2	G protein subunit beta 2. (371 aa)
	DAW1	Dynein assembly factor with WD repeats 1. (415 aa)
	WDR5B	WD repeat domain 5B. (333 aa)
	STRN4	Striatin 4. (666 aa)
	GRWD1	Glutamate rich WD repeat containing 1. (445 aa)
	Wdr86	WD_REPEATS_REGION domain-containing protein. (339 aa)
	FBXW7	F-box and WD repeat domain containing 7. (713 aa)
	WDR48	WD repeat domain 48. (677 aa)
	WDR18	WD repeat domain 18. (432 aa)
	PWP1	PWP1 homolog, endonuclein. (500 aa)
	WDR41	WD repeat domain 41. (461 aa)
	TAF5L	TATA-box binding protein associated factor 5 like. (591 aa)
	APAF1	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. (1247 aa)
	LOC101964060	Uncharacterized protein. (757 aa)
	BTRC	Beta-transducin repeat containing E3 ubiquitin protein ligase. (605 aa)
	Bub3	WD_REPEATS_REGION domain-containing protein. (354 aa)
	FBXW11	F-box and WD repeat domain containing 11. (553 aa)
	KATNB1	Katanin p80 WD40 repeat-containing subunit B1; Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Micr [...] (655 aa)
	PAK1IP1	PAK1 interacting protein 1. (360 aa)
	POC1A	POC1 centriolar protein A. (407 aa)
	PRPF4	Pre-mRNA processing factor 4. (521 aa)
	ENSSTOP00000025258	Uncharacterized protein. (593 aa)
	FBXW2	F-box and WD repeat domain containing 2. (454 aa)
	WSB1	WD repeat and SOCS box containing 1. (421 aa)
	ATG16L1	Autophagy related 16 like 1. (624 aa)
	LOC101969910	Uncharacterized protein. (601 aa)
	STRN3	Striatin 3. (797 aa)
	MLST8	MTOR associated protein, LST8 homolog. (326 aa)
	PEX7	Peroxisomal biogenesis factor 7. (318 aa)
	WDR5	WD repeat domain 5. (384 aa)
	SMU1	SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
	WDR17	WD repeat domain 17. (1313 aa)
	PRPF19	Pre-mRNA processing factor 19. (512 aa)
	GEMIN5	Gem nuclear organelle associated protein 5. (1507 aa)
	DCAF11	DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family. (546 aa)
	Traf7	Uncharacterized protein. (670 aa)
	WDR12	Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (423 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APAF1	DCAF11	ENSSTOP00000019918	ENSSTOP00000031559	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.	0.438
APAF1	ERCC8	ENSSTOP00000019918	ENSSTOP00000004762	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	ERCC excision repair 8, CSA ubiquitin ligase complex subunit.	0.684
APAF1	GEMIN5	ENSSTOP00000019918	ENSSTOP00000031448	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Gem nuclear organelle associated protein 5.	0.559
APAF1	PAAF1	ENSSTOP00000019918	ENSSTOP00000009605	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Proteasomal ATPase associated factor 1.	0.438
APAF1	POC1A	ENSSTOP00000019918	ENSSTOP00000024627	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	POC1 centriolar protein A.	0.509
APAF1	POC1B	ENSSTOP00000019918	ENSSTOP00000005633	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	POC1 centriolar protein B.	0.526
APAF1	RACK1	ENSSTOP00000019918	ENSSTOP00000006306	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Receptor for activated C kinase 1.	0.496
APAF1	RAE1	ENSSTOP00000019918	ENSSTOP00000000330	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Ribonucleic acid export 1.	0.491
APAF1	RBBP4	ENSSTOP00000019918	ENSSTOP00000010777	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	RB binding protein 4, chromatin remodeling factor.	0.514
APAF1	RBBP7	ENSSTOP00000019918	ENSSTOP00000002520	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	RB binding protein 7, chromatin remodeling factor.	0.514
APAF1	TAF5	ENSSTOP00000019918	ENSSTOP00000013029	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	TATA-box binding protein associated factor 5.	0.512
APAF1	TAF5L	ENSSTOP00000019918	ENSSTOP00000018294	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	TATA-box binding protein associated factor 5 like.	0.576
APAF1	TBL1XR1	ENSSTOP00000019918	ENSSTOP00000012770	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Transducin beta like 1 X-linked receptor 1.	0.458
APAF1	TBL2	ENSSTOP00000019918	ENSSTOP00000009877	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Transducin beta like 2.	0.458
APAF1	Tbl1x	ENSSTOP00000019918	ENSSTOP00000012804	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Uncharacterized protein.	0.458
APAF1	WDFY2	ENSSTOP00000019918	ENSSTOP00000003019	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat and FYVE domain containing 2.	0.458
APAF1	WDR18	ENSSTOP00000019918	ENSSTOP00000016936	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat domain 18.	0.458
APAF1	WDR31	ENSSTOP00000019918	ENSSTOP00000000519	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat domain 31.	0.534
APAF1	WDR37	ENSSTOP00000019918	ENSSTOP00000012815	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat domain 37.	0.528
APAF1	WDR38	ENSSTOP00000019918	ENSSTOP00000007048	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat domain 38.	0.506