(10 nodes) Rel homology domain (RHD), DNA-binding domain superfamily network (Ictidomys tridecemlineatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NFKB1	Nuclear factor kappa B subunit 1. (985 aa)
	REL	REL proto-oncogene, NF-kB subunit. (590 aa)
	NFKB2	Nuclear factor kappa B subunit 2. (899 aa)
	NFATC4	Nuclear factor of activated T cells 4. (890 aa)
	NFATC2	Nuclear factor of activated T cells 2. (844 aa)
	RELB	RELB proto-oncogene, NF-kB subunit. (567 aa)
	RELA	RELA proto-oncogene, NF-kB subunit. (551 aa)
	NFAT5	Nuclear factor of activated T cells 5. (1526 aa)
	NFATC3	Nuclear factor of activated T cells 3. (1075 aa)
	NFATC1	Nuclear factor of activated T cells 1. (941 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NFAT5	REL	ENSSTOP00000015966	ENSSTOP00000005176	Nuclear factor of activated T cells 5.	REL proto-oncogene, NF-kB subunit.	0.533
NFATC1	NFATC2	ENSSTOP00000007317	ENSSTOP00000029217	Nuclear factor of activated T cells 1.	Nuclear factor of activated T cells 2.	0.911
NFATC1	NFATC3	ENSSTOP00000007317	ENSSTOP00000015237	Nuclear factor of activated T cells 1.	Nuclear factor of activated T cells 3.	0.860
NFATC1	NFATC4	ENSSTOP00000007317	ENSSTOP00000002571	Nuclear factor of activated T cells 1.	Nuclear factor of activated T cells 4.	0.879
NFATC1	NFKB1	ENSSTOP00000007317	ENSSTOP00000010277	Nuclear factor of activated T cells 1.	Nuclear factor kappa B subunit 1.	0.438
NFATC2	NFATC1	ENSSTOP00000029217	ENSSTOP00000007317	Nuclear factor of activated T cells 2.	Nuclear factor of activated T cells 1.	0.911
NFATC2	NFATC3	ENSSTOP00000029217	ENSSTOP00000015237	Nuclear factor of activated T cells 2.	Nuclear factor of activated T cells 3.	0.865
NFATC2	NFATC4	ENSSTOP00000029217	ENSSTOP00000002571	Nuclear factor of activated T cells 2.	Nuclear factor of activated T cells 4.	0.866
NFATC2	REL	ENSSTOP00000029217	ENSSTOP00000005176	Nuclear factor of activated T cells 2.	REL proto-oncogene, NF-kB subunit.	0.417
NFATC2	RELA	ENSSTOP00000029217	ENSSTOP00000017232	Nuclear factor of activated T cells 2.	RELA proto-oncogene, NF-kB subunit.	0.573
NFATC3	NFATC1	ENSSTOP00000015237	ENSSTOP00000007317	Nuclear factor of activated T cells 3.	Nuclear factor of activated T cells 1.	0.860
NFATC3	NFATC2	ENSSTOP00000015237	ENSSTOP00000029217	Nuclear factor of activated T cells 3.	Nuclear factor of activated T cells 2.	0.865
NFATC3	NFATC4	ENSSTOP00000015237	ENSSTOP00000002571	Nuclear factor of activated T cells 3.	Nuclear factor of activated T cells 4.	0.869
NFATC4	NFATC1	ENSSTOP00000002571	ENSSTOP00000007317	Nuclear factor of activated T cells 4.	Nuclear factor of activated T cells 1.	0.879
NFATC4	NFATC2	ENSSTOP00000002571	ENSSTOP00000029217	Nuclear factor of activated T cells 4.	Nuclear factor of activated T cells 2.	0.866
NFATC4	NFATC3	ENSSTOP00000002571	ENSSTOP00000015237	Nuclear factor of activated T cells 4.	Nuclear factor of activated T cells 3.	0.869
NFKB1	NFATC1	ENSSTOP00000010277	ENSSTOP00000007317	Nuclear factor kappa B subunit 1.	Nuclear factor of activated T cells 1.	0.438
NFKB1	NFKB2	ENSSTOP00000010277	ENSSTOP00000001959	Nuclear factor kappa B subunit 1.	Nuclear factor kappa B subunit 2.	0.989
NFKB1	REL	ENSSTOP00000010277	ENSSTOP00000005176	Nuclear factor kappa B subunit 1.	REL proto-oncogene, NF-kB subunit.	0.994
NFKB1	RELA	ENSSTOP00000010277	ENSSTOP00000017232	Nuclear factor kappa B subunit 1.	RELA proto-oncogene, NF-kB subunit.	0.999