24 items (Ictidomys tridecemlineatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	STRBP	Spermatid perinuclear RNA binding protein. (672 aa)
	ENSSTOP00000030375	Uncharacterized protein. (336 aa)
	TRNT1	tRNA nucleotidyl transferase 1; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (435 aa)
	ILF3	Interleukin enhancer binding factor 3. (896 aa)
	PAPOLA	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (739 aa)
	ZFR2	Zinc finger RNA binding protein 2. (879 aa)
	LOC101958405	Uncharacterized protein. (387 aa)
	OAS1	2'-5'-oligoadenylate synthetase 1. (393 aa)
	MALSU1	Mitochondrial assembly of ribosomal large subunit 1. (243 aa)
	TENT2	Terminal nucleotidyltransferase 2. (483 aa)
	TUT4	Terminal uridylyl transferase 4. (1661 aa)
	DNTT	DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator. (467 aa)
	POLL	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (575 aa)
	PAPOLG	Poly(A) polymerase gamma. (741 aa)
	OAS2	2'-5'-oligoadenylate synthetase 2. (637 aa)
	ZFR	Zinc finger RNA binding protein. (1062 aa)
	POLB	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (306 aa)
	TENT4A	Terminal nucleotidyltransferase 4A. (542 aa)
	OAS3	2'-5'-oligoadenylate synthetase 3. (991 aa)
	Tut1	RRM domain-containing protein. (875 aa)
	POLM	DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family. (494 aa)
	MTPAP	Mitochondrial poly(A) polymerase. (585 aa)
	Ilf2	Uncharacterized protein. (390 aa)
	TUT7	Terminal uridylyl transferase 7. (1475 aa)

Your Current Organism:

Ictidomys tridecemlineatus

NCBI taxonomy Id: 43179
Other names: Citellus tridecemlineatus, I. tridecemlineatus, Spermophilus tridecemlineatus, thirteen-lined ground squirrel

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DNTT	POLB	ENSSTOP00000011414	ENSSTOP00000005240	DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.720
DNTT	POLL	ENSSTOP00000011414	ENSSTOP00000010303	DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator.	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.	0.704
ENSSTOP00000030375	ILF3	ENSSTOP00000030375	ENSSTOP00000026886	Uncharacterized protein.	Interleukin enhancer binding factor 3.	0.955
ENSSTOP00000030375	STRBP	ENSSTOP00000030375	ENSSTOP00000004310	Uncharacterized protein.	Spermatid perinuclear RNA binding protein.	0.714
ENSSTOP00000030375	ZFR	ENSSTOP00000030375	ENSSTOP00000007855	Uncharacterized protein.	Zinc finger RNA binding protein.	0.714
ENSSTOP00000030375	ZFR2	ENSSTOP00000030375	ENSSTOP00000021162	Uncharacterized protein.	Zinc finger RNA binding protein 2.	0.714
ILF3	ENSSTOP00000030375	ENSSTOP00000026886	ENSSTOP00000030375	Interleukin enhancer binding factor 3.	Uncharacterized protein.	0.955
ILF3	Ilf2	ENSSTOP00000026886	ENSSTOP00000000598	Interleukin enhancer binding factor 3.	Uncharacterized protein.	0.955
ILF3	LOC101958405	ENSSTOP00000026886	ENSSTOP00000017202	Interleukin enhancer binding factor 3.	Uncharacterized protein.	0.955
Ilf2	ILF3	ENSSTOP00000000598	ENSSTOP00000026886	Uncharacterized protein.	Interleukin enhancer binding factor 3.	0.955
Ilf2	STRBP	ENSSTOP00000000598	ENSSTOP00000004310	Uncharacterized protein.	Spermatid perinuclear RNA binding protein.	0.714
Ilf2	ZFR	ENSSTOP00000000598	ENSSTOP00000007855	Uncharacterized protein.	Zinc finger RNA binding protein.	0.714
Ilf2	ZFR2	ENSSTOP00000000598	ENSSTOP00000021162	Uncharacterized protein.	Zinc finger RNA binding protein 2.	0.714
LOC101958405	ILF3	ENSSTOP00000017202	ENSSTOP00000026886	Uncharacterized protein.	Interleukin enhancer binding factor 3.	0.955
LOC101958405	STRBP	ENSSTOP00000017202	ENSSTOP00000004310	Uncharacterized protein.	Spermatid perinuclear RNA binding protein.	0.714
LOC101958405	ZFR	ENSSTOP00000017202	ENSSTOP00000007855	Uncharacterized protein.	Zinc finger RNA binding protein.	0.714
LOC101958405	ZFR2	ENSSTOP00000017202	ENSSTOP00000021162	Uncharacterized protein.	Zinc finger RNA binding protein 2.	0.714
MALSU1	TRNT1	ENSSTOP00000016594	ENSSTOP00000028633	Mitochondrial assembly of ribosomal large subunit 1.	tRNA nucleotidyl transferase 1; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.	0.417
MTPAP	PAPOLA	ENSSTOP00000000655	ENSSTOP00000024829	Mitochondrial poly(A) polymerase.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.428
MTPAP	PAPOLG	ENSSTOP00000000655	ENSSTOP00000009753	Mitochondrial poly(A) polymerase.	Poly(A) polymerase gamma.	0.579